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Cancer detection in clinical practice and using blood‐based liquid biopsy: A retrospective audit of over 350 dogs

BACKGROUND: Guidelines‐driven screening protocols for early cancer detection in dogs are lacking, and cancer often is detected at advanced stages. HYPOTHESIS/OBJECTIVES: To examine how cancer typically is detected in dogs and whether the addition of a next‐generation sequencing‐based “liquid biopsy”...

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Autores principales: Flory, Andi, McLennan, Lisa, Peet, Betsy, Kroll, Marissa, Stuart, Deirdre, Brown, Devon, Stuebner, Kathy, Phillips, Brenda, Coomber, Brenda L., Woods, J. Paul, Miller, Mairin, Tripp, Chelsea D., Wolf‐Ringwall, Amber, Kruglyak, Kristina M., McCleary‐Wheeler, Angela L., Phelps‐Dunn, Ashley, Wong, Lilian K., Warren, Chelsea D., Brandstetter, Gina, Rosentel, Michelle C., DiMarzio, Lauren R., O'Kell, Allison L., Cohen, Todd A., Grosu, Daniel S., Chibuk, Jason, Tsui, Dana W. Y., Chorny, Ilya, Rafalko, Jill M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9889684/
https://www.ncbi.nlm.nih.gov/pubmed/36661398
http://dx.doi.org/10.1111/jvim.16616
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author Flory, Andi
McLennan, Lisa
Peet, Betsy
Kroll, Marissa
Stuart, Deirdre
Brown, Devon
Stuebner, Kathy
Phillips, Brenda
Coomber, Brenda L.
Woods, J. Paul
Miller, Mairin
Tripp, Chelsea D.
Wolf‐Ringwall, Amber
Kruglyak, Kristina M.
McCleary‐Wheeler, Angela L.
Phelps‐Dunn, Ashley
Wong, Lilian K.
Warren, Chelsea D.
Brandstetter, Gina
Rosentel, Michelle C.
DiMarzio, Lauren R.
O'Kell, Allison L.
Cohen, Todd A.
Grosu, Daniel S.
Chibuk, Jason
Tsui, Dana W. Y.
Chorny, Ilya
Rafalko, Jill M.
author_facet Flory, Andi
McLennan, Lisa
Peet, Betsy
Kroll, Marissa
Stuart, Deirdre
Brown, Devon
Stuebner, Kathy
Phillips, Brenda
Coomber, Brenda L.
Woods, J. Paul
Miller, Mairin
Tripp, Chelsea D.
Wolf‐Ringwall, Amber
Kruglyak, Kristina M.
McCleary‐Wheeler, Angela L.
Phelps‐Dunn, Ashley
Wong, Lilian K.
Warren, Chelsea D.
Brandstetter, Gina
Rosentel, Michelle C.
DiMarzio, Lauren R.
O'Kell, Allison L.
Cohen, Todd A.
Grosu, Daniel S.
Chibuk, Jason
Tsui, Dana W. Y.
Chorny, Ilya
Rafalko, Jill M.
author_sort Flory, Andi
collection PubMed
description BACKGROUND: Guidelines‐driven screening protocols for early cancer detection in dogs are lacking, and cancer often is detected at advanced stages. HYPOTHESIS/OBJECTIVES: To examine how cancer typically is detected in dogs and whether the addition of a next‐generation sequencing‐based “liquid biopsy” test to a wellness visit has the potential to enhance cancer detection. ANIMALS: Client‐owned dogs with definitive cancer diagnoses enrolled in a clinical validation study for a novel blood‐based multicancer early detection test. METHODS: Retrospective medical record review was performed to establish the history and presenting complaint that ultimately led to a definitive cancer diagnosis. Blood samples were subjected to DNA extraction, library preparation, and next‐generation sequencing. Sequencing data were analyzed using an internally developed bioinformatics pipeline to detect genomic alterations associated with the presence of cancer. RESULTS: In an unselected cohort of 359 cancer‐diagnosed dogs, 4% of cases were detected during a wellness visit, 8% were detected incidentally, and 88% were detected after the owner reported clinical signs suggestive of cancer. Liquid biopsy detected disease in 54.7% (95% confidence interval [CI], 49.5%‐59.8%) of patients, including 32% of dogs with early‐stage cancer, 48% of preclinical dogs, and 84% of dogs with advanced‐stage disease. CONCLUSIONS/CLINICAL IMPORTANCE: Most cases of cancer were diagnosed after the onset of clinical signs; only 4% of dogs had cancer detected using the current standard of care (i.e., wellness visit). Liquid biopsy has the potential to increase detection of cancer when added to a dog's wellness visit.
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spelling pubmed-98896842023-02-02 Cancer detection in clinical practice and using blood‐based liquid biopsy: A retrospective audit of over 350 dogs Flory, Andi McLennan, Lisa Peet, Betsy Kroll, Marissa Stuart, Deirdre Brown, Devon Stuebner, Kathy Phillips, Brenda Coomber, Brenda L. Woods, J. Paul Miller, Mairin Tripp, Chelsea D. Wolf‐Ringwall, Amber Kruglyak, Kristina M. McCleary‐Wheeler, Angela L. Phelps‐Dunn, Ashley Wong, Lilian K. Warren, Chelsea D. Brandstetter, Gina Rosentel, Michelle C. DiMarzio, Lauren R. O'Kell, Allison L. Cohen, Todd A. Grosu, Daniel S. Chibuk, Jason Tsui, Dana W. Y. Chorny, Ilya Rafalko, Jill M. J Vet Intern Med SMALL ANIMAL BACKGROUND: Guidelines‐driven screening protocols for early cancer detection in dogs are lacking, and cancer often is detected at advanced stages. HYPOTHESIS/OBJECTIVES: To examine how cancer typically is detected in dogs and whether the addition of a next‐generation sequencing‐based “liquid biopsy” test to a wellness visit has the potential to enhance cancer detection. ANIMALS: Client‐owned dogs with definitive cancer diagnoses enrolled in a clinical validation study for a novel blood‐based multicancer early detection test. METHODS: Retrospective medical record review was performed to establish the history and presenting complaint that ultimately led to a definitive cancer diagnosis. Blood samples were subjected to DNA extraction, library preparation, and next‐generation sequencing. Sequencing data were analyzed using an internally developed bioinformatics pipeline to detect genomic alterations associated with the presence of cancer. RESULTS: In an unselected cohort of 359 cancer‐diagnosed dogs, 4% of cases were detected during a wellness visit, 8% were detected incidentally, and 88% were detected after the owner reported clinical signs suggestive of cancer. Liquid biopsy detected disease in 54.7% (95% confidence interval [CI], 49.5%‐59.8%) of patients, including 32% of dogs with early‐stage cancer, 48% of preclinical dogs, and 84% of dogs with advanced‐stage disease. CONCLUSIONS/CLINICAL IMPORTANCE: Most cases of cancer were diagnosed after the onset of clinical signs; only 4% of dogs had cancer detected using the current standard of care (i.e., wellness visit). Liquid biopsy has the potential to increase detection of cancer when added to a dog's wellness visit. John Wiley & Sons, Inc. 2023-01-20 /pmc/articles/PMC9889684/ /pubmed/36661398 http://dx.doi.org/10.1111/jvim.16616 Text en © 2023 PetDx, Inc and The Authors. Journal of Veterinary Internal Medicine published by Wiley Periodicals LLC on behalf of American College of Veterinary Internal Medicine. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle SMALL ANIMAL
Flory, Andi
McLennan, Lisa
Peet, Betsy
Kroll, Marissa
Stuart, Deirdre
Brown, Devon
Stuebner, Kathy
Phillips, Brenda
Coomber, Brenda L.
Woods, J. Paul
Miller, Mairin
Tripp, Chelsea D.
Wolf‐Ringwall, Amber
Kruglyak, Kristina M.
McCleary‐Wheeler, Angela L.
Phelps‐Dunn, Ashley
Wong, Lilian K.
Warren, Chelsea D.
Brandstetter, Gina
Rosentel, Michelle C.
DiMarzio, Lauren R.
O'Kell, Allison L.
Cohen, Todd A.
Grosu, Daniel S.
Chibuk, Jason
Tsui, Dana W. Y.
Chorny, Ilya
Rafalko, Jill M.
Cancer detection in clinical practice and using blood‐based liquid biopsy: A retrospective audit of over 350 dogs
title Cancer detection in clinical practice and using blood‐based liquid biopsy: A retrospective audit of over 350 dogs
title_full Cancer detection in clinical practice and using blood‐based liquid biopsy: A retrospective audit of over 350 dogs
title_fullStr Cancer detection in clinical practice and using blood‐based liquid biopsy: A retrospective audit of over 350 dogs
title_full_unstemmed Cancer detection in clinical practice and using blood‐based liquid biopsy: A retrospective audit of over 350 dogs
title_short Cancer detection in clinical practice and using blood‐based liquid biopsy: A retrospective audit of over 350 dogs
title_sort cancer detection in clinical practice and using blood‐based liquid biopsy: a retrospective audit of over 350 dogs
topic SMALL ANIMAL
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9889684/
https://www.ncbi.nlm.nih.gov/pubmed/36661398
http://dx.doi.org/10.1111/jvim.16616
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