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A biphasic model of lifespan in nematode Caenorhabditis elegans worm

Ageing research focuses on identifying lifespan modifiers and understanding and appropriately interpreting their effects. One of the most relevant quantities being studied is the shape of the survival curve that can reveal crucial information on the mechanism of action. Here, we introduce a bilogist...

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Autores principales: Mulla, Suhayl, Ludlam, Adele R., Elragig, Aiman, Slack, Cathy, Balklava, Zita, Stich, Michael, Cheong, Alex
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9890093/
https://www.ncbi.nlm.nih.gov/pubmed/36756060
http://dx.doi.org/10.1098/rsos.220991
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author Mulla, Suhayl
Ludlam, Adele R.
Elragig, Aiman
Slack, Cathy
Balklava, Zita
Stich, Michael
Cheong, Alex
author_facet Mulla, Suhayl
Ludlam, Adele R.
Elragig, Aiman
Slack, Cathy
Balklava, Zita
Stich, Michael
Cheong, Alex
author_sort Mulla, Suhayl
collection PubMed
description Ageing research focuses on identifying lifespan modifiers and understanding and appropriately interpreting their effects. One of the most relevant quantities being studied is the shape of the survival curve that can reveal crucial information on the mechanism of action. Here, we introduce a bilogistic model to describe the shape of the lifespan curves of Caenorhabditis elegans populations. Using the corrected Akaike information criterion and the RMSE as goodness-of-fit tests, we show that the bilogistic model provides a better fit to the experimental data from nematode worms than other mathematical models and can identify and confirm biphasic lifespan data. Our parametric model offers a method to interpret replicate experiments data in terms of the shape parameters of the lifespan curve and enables robust statistical analysis of intra- and inter-group variance. We apply the model to novel lifespan data from C. elegans and Drosophila melanogaster and provide a rational statistical analysis of lifespan modifiers such as temperature and daf-16/FOXO mutation.
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spelling pubmed-98900932023-02-07 A biphasic model of lifespan in nematode Caenorhabditis elegans worm Mulla, Suhayl Ludlam, Adele R. Elragig, Aiman Slack, Cathy Balklava, Zita Stich, Michael Cheong, Alex R Soc Open Sci Organismal and Evolutionary Biology Ageing research focuses on identifying lifespan modifiers and understanding and appropriately interpreting their effects. One of the most relevant quantities being studied is the shape of the survival curve that can reveal crucial information on the mechanism of action. Here, we introduce a bilogistic model to describe the shape of the lifespan curves of Caenorhabditis elegans populations. Using the corrected Akaike information criterion and the RMSE as goodness-of-fit tests, we show that the bilogistic model provides a better fit to the experimental data from nematode worms than other mathematical models and can identify and confirm biphasic lifespan data. Our parametric model offers a method to interpret replicate experiments data in terms of the shape parameters of the lifespan curve and enables robust statistical analysis of intra- and inter-group variance. We apply the model to novel lifespan data from C. elegans and Drosophila melanogaster and provide a rational statistical analysis of lifespan modifiers such as temperature and daf-16/FOXO mutation. The Royal Society 2023-02-01 /pmc/articles/PMC9890093/ /pubmed/36756060 http://dx.doi.org/10.1098/rsos.220991 Text en © 2023 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited.
spellingShingle Organismal and Evolutionary Biology
Mulla, Suhayl
Ludlam, Adele R.
Elragig, Aiman
Slack, Cathy
Balklava, Zita
Stich, Michael
Cheong, Alex
A biphasic model of lifespan in nematode Caenorhabditis elegans worm
title A biphasic model of lifespan in nematode Caenorhabditis elegans worm
title_full A biphasic model of lifespan in nematode Caenorhabditis elegans worm
title_fullStr A biphasic model of lifespan in nematode Caenorhabditis elegans worm
title_full_unstemmed A biphasic model of lifespan in nematode Caenorhabditis elegans worm
title_short A biphasic model of lifespan in nematode Caenorhabditis elegans worm
title_sort biphasic model of lifespan in nematode caenorhabditis elegans worm
topic Organismal and Evolutionary Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9890093/
https://www.ncbi.nlm.nih.gov/pubmed/36756060
http://dx.doi.org/10.1098/rsos.220991
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