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A biphasic model of lifespan in nematode Caenorhabditis elegans worm
Ageing research focuses on identifying lifespan modifiers and understanding and appropriately interpreting their effects. One of the most relevant quantities being studied is the shape of the survival curve that can reveal crucial information on the mechanism of action. Here, we introduce a bilogist...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9890093/ https://www.ncbi.nlm.nih.gov/pubmed/36756060 http://dx.doi.org/10.1098/rsos.220991 |
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author | Mulla, Suhayl Ludlam, Adele R. Elragig, Aiman Slack, Cathy Balklava, Zita Stich, Michael Cheong, Alex |
author_facet | Mulla, Suhayl Ludlam, Adele R. Elragig, Aiman Slack, Cathy Balklava, Zita Stich, Michael Cheong, Alex |
author_sort | Mulla, Suhayl |
collection | PubMed |
description | Ageing research focuses on identifying lifespan modifiers and understanding and appropriately interpreting their effects. One of the most relevant quantities being studied is the shape of the survival curve that can reveal crucial information on the mechanism of action. Here, we introduce a bilogistic model to describe the shape of the lifespan curves of Caenorhabditis elegans populations. Using the corrected Akaike information criterion and the RMSE as goodness-of-fit tests, we show that the bilogistic model provides a better fit to the experimental data from nematode worms than other mathematical models and can identify and confirm biphasic lifespan data. Our parametric model offers a method to interpret replicate experiments data in terms of the shape parameters of the lifespan curve and enables robust statistical analysis of intra- and inter-group variance. We apply the model to novel lifespan data from C. elegans and Drosophila melanogaster and provide a rational statistical analysis of lifespan modifiers such as temperature and daf-16/FOXO mutation. |
format | Online Article Text |
id | pubmed-9890093 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-98900932023-02-07 A biphasic model of lifespan in nematode Caenorhabditis elegans worm Mulla, Suhayl Ludlam, Adele R. Elragig, Aiman Slack, Cathy Balklava, Zita Stich, Michael Cheong, Alex R Soc Open Sci Organismal and Evolutionary Biology Ageing research focuses on identifying lifespan modifiers and understanding and appropriately interpreting their effects. One of the most relevant quantities being studied is the shape of the survival curve that can reveal crucial information on the mechanism of action. Here, we introduce a bilogistic model to describe the shape of the lifespan curves of Caenorhabditis elegans populations. Using the corrected Akaike information criterion and the RMSE as goodness-of-fit tests, we show that the bilogistic model provides a better fit to the experimental data from nematode worms than other mathematical models and can identify and confirm biphasic lifespan data. Our parametric model offers a method to interpret replicate experiments data in terms of the shape parameters of the lifespan curve and enables robust statistical analysis of intra- and inter-group variance. We apply the model to novel lifespan data from C. elegans and Drosophila melanogaster and provide a rational statistical analysis of lifespan modifiers such as temperature and daf-16/FOXO mutation. The Royal Society 2023-02-01 /pmc/articles/PMC9890093/ /pubmed/36756060 http://dx.doi.org/10.1098/rsos.220991 Text en © 2023 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Organismal and Evolutionary Biology Mulla, Suhayl Ludlam, Adele R. Elragig, Aiman Slack, Cathy Balklava, Zita Stich, Michael Cheong, Alex A biphasic model of lifespan in nematode Caenorhabditis elegans worm |
title | A biphasic model of lifespan in nematode Caenorhabditis elegans worm |
title_full | A biphasic model of lifespan in nematode Caenorhabditis elegans worm |
title_fullStr | A biphasic model of lifespan in nematode Caenorhabditis elegans worm |
title_full_unstemmed | A biphasic model of lifespan in nematode Caenorhabditis elegans worm |
title_short | A biphasic model of lifespan in nematode Caenorhabditis elegans worm |
title_sort | biphasic model of lifespan in nematode caenorhabditis elegans worm |
topic | Organismal and Evolutionary Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9890093/ https://www.ncbi.nlm.nih.gov/pubmed/36756060 http://dx.doi.org/10.1098/rsos.220991 |
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