Cargando…

Landmark tracking in liver US images using cascade convolutional neural networks with long short-term memory

Accurate tracking of anatomic landmarks is critical for motion management in liver radiation therapy. Ultrasound (US) is a safe, low-cost technology that is broadly available and offer real-time imaging capability. This study proposed a deep learning-based tracking method for the US image-guided rad...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Yupei, Dai, Xianjin, Tian, Zhen, Lei, Yang, Wynne, Jacob F, Patel, Pretesh, Chen, Yue, Liu, Tian, Yang, Xiaofeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: IOP Publishing 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9893725/
https://www.ncbi.nlm.nih.gov/pubmed/36743834
http://dx.doi.org/10.1088/1361-6501/acb5b3
_version_ 1784881588239073280
author Zhang, Yupei
Dai, Xianjin
Tian, Zhen
Lei, Yang
Wynne, Jacob F
Patel, Pretesh
Chen, Yue
Liu, Tian
Yang, Xiaofeng
author_facet Zhang, Yupei
Dai, Xianjin
Tian, Zhen
Lei, Yang
Wynne, Jacob F
Patel, Pretesh
Chen, Yue
Liu, Tian
Yang, Xiaofeng
author_sort Zhang, Yupei
collection PubMed
description Accurate tracking of anatomic landmarks is critical for motion management in liver radiation therapy. Ultrasound (US) is a safe, low-cost technology that is broadly available and offer real-time imaging capability. This study proposed a deep learning-based tracking method for the US image-guided radiation therapy. The proposed cascade deep learning model is composed of an attention network, a mask region-based convolutional neural network (mask R-CNN), and a long short-term memory (LSTM) network. The attention network learns a mapping from an US image to a suspected area of landmark motion in order to reduce the search region. The mask R-CNN then produces multiple region-of-interest proposals in the reduced region and identifies the proposed landmark via three network heads: bounding box regression, proposal classification, and landmark segmentation. The LSTM network models the temporal relationship among the successive image frames for bounding box regression and proposal classification. To consolidate the final proposal, a selection method is designed according to the similarities between sequential frames. The proposed method was tested on the liver US tracking datasets used in the medical image computing and computer assisted interventions 2015 challenges, where the landmarks were annotated by three experienced observers to obtain their mean positions. Five-fold cross validation on the 24 given US sequences with ground truths shows that the mean tracking error for all landmarks is 0.65 ± 0.56 mm, and the errors of all landmarks are within 2 mm. We further tested the proposed model on 69 landmarks from the testing dataset that have the similar image pattern with the training pattern, resulting in a mean tracking error of 0.94 ± 0.83 mm. The proposed deep-learning model was implemented on a graphics processing unit (GPU), tracking 47–81 frames s(−1). Our experimental results have demonstrated the feasibility and accuracy of our proposed method in tracking liver anatomic landmarks using US images, providing a potential solution for real-time liver tracking for active motion management during radiation therapy.
format Online
Article
Text
id pubmed-9893725
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher IOP Publishing
record_format MEDLINE/PubMed
spelling pubmed-98937252023-02-03 Landmark tracking in liver US images using cascade convolutional neural networks with long short-term memory Zhang, Yupei Dai, Xianjin Tian, Zhen Lei, Yang Wynne, Jacob F Patel, Pretesh Chen, Yue Liu, Tian Yang, Xiaofeng Meas Sci Technol Paper Accurate tracking of anatomic landmarks is critical for motion management in liver radiation therapy. Ultrasound (US) is a safe, low-cost technology that is broadly available and offer real-time imaging capability. This study proposed a deep learning-based tracking method for the US image-guided radiation therapy. The proposed cascade deep learning model is composed of an attention network, a mask region-based convolutional neural network (mask R-CNN), and a long short-term memory (LSTM) network. The attention network learns a mapping from an US image to a suspected area of landmark motion in order to reduce the search region. The mask R-CNN then produces multiple region-of-interest proposals in the reduced region and identifies the proposed landmark via three network heads: bounding box regression, proposal classification, and landmark segmentation. The LSTM network models the temporal relationship among the successive image frames for bounding box regression and proposal classification. To consolidate the final proposal, a selection method is designed according to the similarities between sequential frames. The proposed method was tested on the liver US tracking datasets used in the medical image computing and computer assisted interventions 2015 challenges, where the landmarks were annotated by three experienced observers to obtain their mean positions. Five-fold cross validation on the 24 given US sequences with ground truths shows that the mean tracking error for all landmarks is 0.65 ± 0.56 mm, and the errors of all landmarks are within 2 mm. We further tested the proposed model on 69 landmarks from the testing dataset that have the similar image pattern with the training pattern, resulting in a mean tracking error of 0.94 ± 0.83 mm. The proposed deep-learning model was implemented on a graphics processing unit (GPU), tracking 47–81 frames s(−1). Our experimental results have demonstrated the feasibility and accuracy of our proposed method in tracking liver anatomic landmarks using US images, providing a potential solution for real-time liver tracking for active motion management during radiation therapy. IOP Publishing 2023-05-01 2023-02-02 /pmc/articles/PMC9893725/ /pubmed/36743834 http://dx.doi.org/10.1088/1361-6501/acb5b3 Text en © 2023 The Author(s). Published by IOP Publishing Ltd https://creativecommons.org/licenses/by/4.0/ Original content from this work may be used under the terms of the Creative Commons Attribution 4.0 license (https://creativecommons.org/licenses/by/4.0/) . Any further distribution of this work must maintain attribution to the author(s) and the title of the work, journal citation and DOI.
spellingShingle Paper
Zhang, Yupei
Dai, Xianjin
Tian, Zhen
Lei, Yang
Wynne, Jacob F
Patel, Pretesh
Chen, Yue
Liu, Tian
Yang, Xiaofeng
Landmark tracking in liver US images using cascade convolutional neural networks with long short-term memory
title Landmark tracking in liver US images using cascade convolutional neural networks with long short-term memory
title_full Landmark tracking in liver US images using cascade convolutional neural networks with long short-term memory
title_fullStr Landmark tracking in liver US images using cascade convolutional neural networks with long short-term memory
title_full_unstemmed Landmark tracking in liver US images using cascade convolutional neural networks with long short-term memory
title_short Landmark tracking in liver US images using cascade convolutional neural networks with long short-term memory
title_sort landmark tracking in liver us images using cascade convolutional neural networks with long short-term memory
topic Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9893725/
https://www.ncbi.nlm.nih.gov/pubmed/36743834
http://dx.doi.org/10.1088/1361-6501/acb5b3
work_keys_str_mv AT zhangyupei landmarktrackinginliverusimagesusingcascadeconvolutionalneuralnetworkswithlongshorttermmemory
AT daixianjin landmarktrackinginliverusimagesusingcascadeconvolutionalneuralnetworkswithlongshorttermmemory
AT tianzhen landmarktrackinginliverusimagesusingcascadeconvolutionalneuralnetworkswithlongshorttermmemory
AT leiyang landmarktrackinginliverusimagesusingcascadeconvolutionalneuralnetworkswithlongshorttermmemory
AT wynnejacobf landmarktrackinginliverusimagesusingcascadeconvolutionalneuralnetworkswithlongshorttermmemory
AT patelpretesh landmarktrackinginliverusimagesusingcascadeconvolutionalneuralnetworkswithlongshorttermmemory
AT chenyue landmarktrackinginliverusimagesusingcascadeconvolutionalneuralnetworkswithlongshorttermmemory
AT liutian landmarktrackinginliverusimagesusingcascadeconvolutionalneuralnetworkswithlongshorttermmemory
AT yangxiaofeng landmarktrackinginliverusimagesusingcascadeconvolutionalneuralnetworkswithlongshorttermmemory