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Regularization approaches in clinical biostatistics: A review of methods and their applications
A range of regularization approaches have been proposed in the data sciences to overcome overfitting, to exploit sparsity or to improve prediction. Using a broad definition of regularization, namely controlling model complexity by adding information in order to solve ill-posed problems or to prevent...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9896544/ https://www.ncbi.nlm.nih.gov/pubmed/36384320 http://dx.doi.org/10.1177/09622802221133557 |
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author | Friedrich, Sarah Groll, Andreas Ickstadt, Katja Kneib, Thomas Pauly, Markus Rahnenführer, Jörg Friede, Tim |
author_facet | Friedrich, Sarah Groll, Andreas Ickstadt, Katja Kneib, Thomas Pauly, Markus Rahnenführer, Jörg Friede, Tim |
author_sort | Friedrich, Sarah |
collection | PubMed |
description | A range of regularization approaches have been proposed in the data sciences to overcome overfitting, to exploit sparsity or to improve prediction. Using a broad definition of regularization, namely controlling model complexity by adding information in order to solve ill-posed problems or to prevent overfitting, we review a range of approaches within this framework including penalization, early stopping, ensembling and model averaging. Aspects of their practical implementation are discussed including available R-packages and examples are provided. To assess the extent to which these approaches are used in medicine, we conducted a review of three general medical journals. It revealed that regularization approaches are rarely applied in practical clinical applications, with the exception of random effects models. Hence, we suggest a more frequent use of regularization approaches in medical research. In situations where also other approaches work well, the only downside of the regularization approaches is increased complexity in the conduct of the analyses which can pose challenges in terms of computational resources and expertise on the side of the data analyst. In our view, both can and should be overcome by investments in appropriate computing facilities and educational resources. |
format | Online Article Text |
id | pubmed-9896544 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-98965442023-02-04 Regularization approaches in clinical biostatistics: A review of methods and their applications Friedrich, Sarah Groll, Andreas Ickstadt, Katja Kneib, Thomas Pauly, Markus Rahnenführer, Jörg Friede, Tim Stat Methods Med Res Review Article A range of regularization approaches have been proposed in the data sciences to overcome overfitting, to exploit sparsity or to improve prediction. Using a broad definition of regularization, namely controlling model complexity by adding information in order to solve ill-posed problems or to prevent overfitting, we review a range of approaches within this framework including penalization, early stopping, ensembling and model averaging. Aspects of their practical implementation are discussed including available R-packages and examples are provided. To assess the extent to which these approaches are used in medicine, we conducted a review of three general medical journals. It revealed that regularization approaches are rarely applied in practical clinical applications, with the exception of random effects models. Hence, we suggest a more frequent use of regularization approaches in medical research. In situations where also other approaches work well, the only downside of the regularization approaches is increased complexity in the conduct of the analyses which can pose challenges in terms of computational resources and expertise on the side of the data analyst. In our view, both can and should be overcome by investments in appropriate computing facilities and educational resources. SAGE Publications 2022-11-16 2023-02 /pmc/articles/PMC9896544/ /pubmed/36384320 http://dx.doi.org/10.1177/09622802221133557 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution 4.0 License (https://creativecommons.org/licenses/by/4.0/) which permits any use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access page (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Review Article Friedrich, Sarah Groll, Andreas Ickstadt, Katja Kneib, Thomas Pauly, Markus Rahnenführer, Jörg Friede, Tim Regularization approaches in clinical biostatistics: A review of methods and their applications |
title | Regularization approaches in clinical biostatistics: A review of
methods and their applications |
title_full | Regularization approaches in clinical biostatistics: A review of
methods and their applications |
title_fullStr | Regularization approaches in clinical biostatistics: A review of
methods and their applications |
title_full_unstemmed | Regularization approaches in clinical biostatistics: A review of
methods and their applications |
title_short | Regularization approaches in clinical biostatistics: A review of
methods and their applications |
title_sort | regularization approaches in clinical biostatistics: a review of
methods and their applications |
topic | Review Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9896544/ https://www.ncbi.nlm.nih.gov/pubmed/36384320 http://dx.doi.org/10.1177/09622802221133557 |
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