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Automated Library Generation and Serendipity Quantification Enables Diverse Discovery in Coordination Chemistry
[Image: see text] Library generation experiments are a key part of the discovery of new materials, methods, and models in chemistry, but the question of how to generate high quality libraries to enable discovery is nontrivial. Herein, we use coordination chemistry to demonstrate the automation of ma...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9896557/ https://www.ncbi.nlm.nih.gov/pubmed/36649125 http://dx.doi.org/10.1021/jacs.2c11066 |
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author | Kowalski, Daniel J. MacGregor, Catriona M. Long, De-Liang Bell, Nicola L. Cronin, Leroy |
author_facet | Kowalski, Daniel J. MacGregor, Catriona M. Long, De-Liang Bell, Nicola L. Cronin, Leroy |
author_sort | Kowalski, Daniel J. |
collection | PubMed |
description | [Image: see text] Library generation experiments are a key part of the discovery of new materials, methods, and models in chemistry, but the question of how to generate high quality libraries to enable discovery is nontrivial. Herein, we use coordination chemistry to demonstrate the automation of many of the workflows used for library generation in automated hardware including the Chemputer. First, we explore the target-oriented synthesis of three influential coordination complexes, to validate key synthetic operations in our system; second, the generation of focused libraries in chemical and process space; and third, the development of a new workflow for prospecting library formation. This involved Bayesian optimization using a Gaussian process as surrogate model combined with a metric for novelty (or serendipity) quantification based on mass spectrometry data. In this way, we show directed exploration of a process space toward those areas with rarer observations and build a picture of the diversity in product distributions present across the space. We show that this effectively “engineers” serendipity into our search through the unexpected appearance of acetic anhydride, formed in situ, and solvent degradation products as ligands in an isolable series of three Co(III) anhydride complexes. |
format | Online Article Text |
id | pubmed-9896557 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-98965572023-02-04 Automated Library Generation and Serendipity Quantification Enables Diverse Discovery in Coordination Chemistry Kowalski, Daniel J. MacGregor, Catriona M. Long, De-Liang Bell, Nicola L. Cronin, Leroy J Am Chem Soc [Image: see text] Library generation experiments are a key part of the discovery of new materials, methods, and models in chemistry, but the question of how to generate high quality libraries to enable discovery is nontrivial. Herein, we use coordination chemistry to demonstrate the automation of many of the workflows used for library generation in automated hardware including the Chemputer. First, we explore the target-oriented synthesis of three influential coordination complexes, to validate key synthetic operations in our system; second, the generation of focused libraries in chemical and process space; and third, the development of a new workflow for prospecting library formation. This involved Bayesian optimization using a Gaussian process as surrogate model combined with a metric for novelty (or serendipity) quantification based on mass spectrometry data. In this way, we show directed exploration of a process space toward those areas with rarer observations and build a picture of the diversity in product distributions present across the space. We show that this effectively “engineers” serendipity into our search through the unexpected appearance of acetic anhydride, formed in situ, and solvent degradation products as ligands in an isolable series of three Co(III) anhydride complexes. American Chemical Society 2023-01-17 /pmc/articles/PMC9896557/ /pubmed/36649125 http://dx.doi.org/10.1021/jacs.2c11066 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Kowalski, Daniel J. MacGregor, Catriona M. Long, De-Liang Bell, Nicola L. Cronin, Leroy Automated Library Generation and Serendipity Quantification Enables Diverse Discovery in Coordination Chemistry |
title | Automated Library Generation
and Serendipity Quantification
Enables Diverse Discovery in Coordination Chemistry |
title_full | Automated Library Generation
and Serendipity Quantification
Enables Diverse Discovery in Coordination Chemistry |
title_fullStr | Automated Library Generation
and Serendipity Quantification
Enables Diverse Discovery in Coordination Chemistry |
title_full_unstemmed | Automated Library Generation
and Serendipity Quantification
Enables Diverse Discovery in Coordination Chemistry |
title_short | Automated Library Generation
and Serendipity Quantification
Enables Diverse Discovery in Coordination Chemistry |
title_sort | automated library generation
and serendipity quantification
enables diverse discovery in coordination chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9896557/ https://www.ncbi.nlm.nih.gov/pubmed/36649125 http://dx.doi.org/10.1021/jacs.2c11066 |
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