Cargando…

Automated Library Generation and Serendipity Quantification Enables Diverse Discovery in Coordination Chemistry

[Image: see text] Library generation experiments are a key part of the discovery of new materials, methods, and models in chemistry, but the question of how to generate high quality libraries to enable discovery is nontrivial. Herein, we use coordination chemistry to demonstrate the automation of ma...

Descripción completa

Detalles Bibliográficos
Autores principales: Kowalski, Daniel J., MacGregor, Catriona M., Long, De-Liang, Bell, Nicola L., Cronin, Leroy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9896557/
https://www.ncbi.nlm.nih.gov/pubmed/36649125
http://dx.doi.org/10.1021/jacs.2c11066
_version_ 1784882077386145792
author Kowalski, Daniel J.
MacGregor, Catriona M.
Long, De-Liang
Bell, Nicola L.
Cronin, Leroy
author_facet Kowalski, Daniel J.
MacGregor, Catriona M.
Long, De-Liang
Bell, Nicola L.
Cronin, Leroy
author_sort Kowalski, Daniel J.
collection PubMed
description [Image: see text] Library generation experiments are a key part of the discovery of new materials, methods, and models in chemistry, but the question of how to generate high quality libraries to enable discovery is nontrivial. Herein, we use coordination chemistry to demonstrate the automation of many of the workflows used for library generation in automated hardware including the Chemputer. First, we explore the target-oriented synthesis of three influential coordination complexes, to validate key synthetic operations in our system; second, the generation of focused libraries in chemical and process space; and third, the development of a new workflow for prospecting library formation. This involved Bayesian optimization using a Gaussian process as surrogate model combined with a metric for novelty (or serendipity) quantification based on mass spectrometry data. In this way, we show directed exploration of a process space toward those areas with rarer observations and build a picture of the diversity in product distributions present across the space. We show that this effectively “engineers” serendipity into our search through the unexpected appearance of acetic anhydride, formed in situ, and solvent degradation products as ligands in an isolable series of three Co(III) anhydride complexes.
format Online
Article
Text
id pubmed-9896557
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher American Chemical Society
record_format MEDLINE/PubMed
spelling pubmed-98965572023-02-04 Automated Library Generation and Serendipity Quantification Enables Diverse Discovery in Coordination Chemistry Kowalski, Daniel J. MacGregor, Catriona M. Long, De-Liang Bell, Nicola L. Cronin, Leroy J Am Chem Soc [Image: see text] Library generation experiments are a key part of the discovery of new materials, methods, and models in chemistry, but the question of how to generate high quality libraries to enable discovery is nontrivial. Herein, we use coordination chemistry to demonstrate the automation of many of the workflows used for library generation in automated hardware including the Chemputer. First, we explore the target-oriented synthesis of three influential coordination complexes, to validate key synthetic operations in our system; second, the generation of focused libraries in chemical and process space; and third, the development of a new workflow for prospecting library formation. This involved Bayesian optimization using a Gaussian process as surrogate model combined with a metric for novelty (or serendipity) quantification based on mass spectrometry data. In this way, we show directed exploration of a process space toward those areas with rarer observations and build a picture of the diversity in product distributions present across the space. We show that this effectively “engineers” serendipity into our search through the unexpected appearance of acetic anhydride, formed in situ, and solvent degradation products as ligands in an isolable series of three Co(III) anhydride complexes. American Chemical Society 2023-01-17 /pmc/articles/PMC9896557/ /pubmed/36649125 http://dx.doi.org/10.1021/jacs.2c11066 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Kowalski, Daniel J.
MacGregor, Catriona M.
Long, De-Liang
Bell, Nicola L.
Cronin, Leroy
Automated Library Generation and Serendipity Quantification Enables Diverse Discovery in Coordination Chemistry
title Automated Library Generation and Serendipity Quantification Enables Diverse Discovery in Coordination Chemistry
title_full Automated Library Generation and Serendipity Quantification Enables Diverse Discovery in Coordination Chemistry
title_fullStr Automated Library Generation and Serendipity Quantification Enables Diverse Discovery in Coordination Chemistry
title_full_unstemmed Automated Library Generation and Serendipity Quantification Enables Diverse Discovery in Coordination Chemistry
title_short Automated Library Generation and Serendipity Quantification Enables Diverse Discovery in Coordination Chemistry
title_sort automated library generation and serendipity quantification enables diverse discovery in coordination chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9896557/
https://www.ncbi.nlm.nih.gov/pubmed/36649125
http://dx.doi.org/10.1021/jacs.2c11066
work_keys_str_mv AT kowalskidanielj automatedlibrarygenerationandserendipityquantificationenablesdiversediscoveryincoordinationchemistry
AT macgregorcatrionam automatedlibrarygenerationandserendipityquantificationenablesdiversediscoveryincoordinationchemistry
AT longdeliang automatedlibrarygenerationandserendipityquantificationenablesdiversediscoveryincoordinationchemistry
AT bellnicolal automatedlibrarygenerationandserendipityquantificationenablesdiversediscoveryincoordinationchemistry
AT croninleroy automatedlibrarygenerationandserendipityquantificationenablesdiversediscoveryincoordinationchemistry