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Genetic scores for predicting longevity in the Croatian oldest-old population

Longevity is a hallmark of successful ageing and a complex trait with a significant genetic component. In this study, 43 single nucleotide polymorphisms (SNPs) were chosen from the literature and genotyped in a Croatian oldest-old sample (85+ years, sample size (N) = 314), in order to determine whet...

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Autores principales: Šetinc, Maja, Celinšćak, Željka, Bočkor, Luka, Ćorić, Tanja, Kolarić, Branko, Stojanović Marković, Anita, Zajc Petranović, Matea, Peričić Salihović, Marijana, Smolej Narančić, Nina, Škarić-Jurić, Tatjana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9897585/
https://www.ncbi.nlm.nih.gov/pubmed/36735720
http://dx.doi.org/10.1371/journal.pone.0279971
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author Šetinc, Maja
Celinšćak, Željka
Bočkor, Luka
Ćorić, Tanja
Kolarić, Branko
Stojanović Marković, Anita
Zajc Petranović, Matea
Peričić Salihović, Marijana
Smolej Narančić, Nina
Škarić-Jurić, Tatjana
author_facet Šetinc, Maja
Celinšćak, Željka
Bočkor, Luka
Ćorić, Tanja
Kolarić, Branko
Stojanović Marković, Anita
Zajc Petranović, Matea
Peričić Salihović, Marijana
Smolej Narančić, Nina
Škarić-Jurić, Tatjana
author_sort Šetinc, Maja
collection PubMed
description Longevity is a hallmark of successful ageing and a complex trait with a significant genetic component. In this study, 43 single nucleotide polymorphisms (SNPs) were chosen from the literature and genotyped in a Croatian oldest-old sample (85+ years, sample size (N) = 314), in order to determine whether any of these SNPs have a significant effect on reaching the age thresholds for longevity (90+ years, N = 212) and extreme longevity (95+ years, N = 84). The best models were selected for both survival ages using multivariate logistic regression. In the model for reaching age 90, nine SNPs explained 20% of variance for survival to that age, while the 95-year model included five SNPs accounting for 9.3% of variance. The two SNPs that showed the most significant association (p ≤ 0.01) with longevity were TERC rs16847897 and GHRHR rs2267723. Unweighted and weighted Genetic Longevity Scores (uGLS and wGLS) were calculated and their predictive power was tested. All four scores showed significant correlation with age at death (p ≤ 0.01). They also passed the ROC curve test with at least 50% predictive ability, but wGLS90 stood out as the most accurate score, with a 69% chance of accurately predicting survival to the age of 90.
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spelling pubmed-98975852023-02-04 Genetic scores for predicting longevity in the Croatian oldest-old population Šetinc, Maja Celinšćak, Željka Bočkor, Luka Ćorić, Tanja Kolarić, Branko Stojanović Marković, Anita Zajc Petranović, Matea Peričić Salihović, Marijana Smolej Narančić, Nina Škarić-Jurić, Tatjana PLoS One Research Article Longevity is a hallmark of successful ageing and a complex trait with a significant genetic component. In this study, 43 single nucleotide polymorphisms (SNPs) were chosen from the literature and genotyped in a Croatian oldest-old sample (85+ years, sample size (N) = 314), in order to determine whether any of these SNPs have a significant effect on reaching the age thresholds for longevity (90+ years, N = 212) and extreme longevity (95+ years, N = 84). The best models were selected for both survival ages using multivariate logistic regression. In the model for reaching age 90, nine SNPs explained 20% of variance for survival to that age, while the 95-year model included five SNPs accounting for 9.3% of variance. The two SNPs that showed the most significant association (p ≤ 0.01) with longevity were TERC rs16847897 and GHRHR rs2267723. Unweighted and weighted Genetic Longevity Scores (uGLS and wGLS) were calculated and their predictive power was tested. All four scores showed significant correlation with age at death (p ≤ 0.01). They also passed the ROC curve test with at least 50% predictive ability, but wGLS90 stood out as the most accurate score, with a 69% chance of accurately predicting survival to the age of 90. Public Library of Science 2023-02-03 /pmc/articles/PMC9897585/ /pubmed/36735720 http://dx.doi.org/10.1371/journal.pone.0279971 Text en © 2023 Šetinc et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Šetinc, Maja
Celinšćak, Željka
Bočkor, Luka
Ćorić, Tanja
Kolarić, Branko
Stojanović Marković, Anita
Zajc Petranović, Matea
Peričić Salihović, Marijana
Smolej Narančić, Nina
Škarić-Jurić, Tatjana
Genetic scores for predicting longevity in the Croatian oldest-old population
title Genetic scores for predicting longevity in the Croatian oldest-old population
title_full Genetic scores for predicting longevity in the Croatian oldest-old population
title_fullStr Genetic scores for predicting longevity in the Croatian oldest-old population
title_full_unstemmed Genetic scores for predicting longevity in the Croatian oldest-old population
title_short Genetic scores for predicting longevity in the Croatian oldest-old population
title_sort genetic scores for predicting longevity in the croatian oldest-old population
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9897585/
https://www.ncbi.nlm.nih.gov/pubmed/36735720
http://dx.doi.org/10.1371/journal.pone.0279971
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