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Chákṣu: A glaucoma specific fundus image database

We introduce Chákṣu–a retinal fundus image database for the evaluation of computer-assisted glaucoma prescreening techniques. The database contains 1345 color fundus images acquired using three brands of commercially available fundus cameras. Each image is provided with the outlines for the optic di...

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Autores principales: Kumar, J. R. Harish, Seelamantula, Chandra Sekhar, Gagan, J. H., Kamath, Yogish S., Kuzhuppilly, Neetha I. R., Vivekanand, U., Gupta, Preeti, Patil, Shilpa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9898274/
https://www.ncbi.nlm.nih.gov/pubmed/36737439
http://dx.doi.org/10.1038/s41597-023-01943-4
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author Kumar, J. R. Harish
Seelamantula, Chandra Sekhar
Gagan, J. H.
Kamath, Yogish S.
Kuzhuppilly, Neetha I. R.
Vivekanand, U.
Gupta, Preeti
Patil, Shilpa
author_facet Kumar, J. R. Harish
Seelamantula, Chandra Sekhar
Gagan, J. H.
Kamath, Yogish S.
Kuzhuppilly, Neetha I. R.
Vivekanand, U.
Gupta, Preeti
Patil, Shilpa
author_sort Kumar, J. R. Harish
collection PubMed
description We introduce Chákṣu–a retinal fundus image database for the evaluation of computer-assisted glaucoma prescreening techniques. The database contains 1345 color fundus images acquired using three brands of commercially available fundus cameras. Each image is provided with the outlines for the optic disc (OD) and optic cup (OC) using smooth closed contours and a decision of normal versus glaucomatous by five expert ophthalmologists. In addition, segmentation ground-truths of the OD and OC are provided by fusing the expert annotations using the mean, median, majority, and Simultaneous Truth and Performance Level Estimation (STAPLE) algorithm. The performance indices show that the ground-truth agreement with the experts is the best with STAPLE algorithm, followed by majority, median, and mean. The vertical, horizontal, and area cup-to-disc ratios are provided based on the expert annotations. Image-wise glaucoma decisions are also provided based on majority voting among the experts. Chákṣu is the largest Indian-ethnicity-specific fundus image database with expert annotations and would aid in the development of artificial intelligence based glaucoma diagnostics.
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spelling pubmed-98982742023-02-05 Chákṣu: A glaucoma specific fundus image database Kumar, J. R. Harish Seelamantula, Chandra Sekhar Gagan, J. H. Kamath, Yogish S. Kuzhuppilly, Neetha I. R. Vivekanand, U. Gupta, Preeti Patil, Shilpa Sci Data Data Descriptor We introduce Chákṣu–a retinal fundus image database for the evaluation of computer-assisted glaucoma prescreening techniques. The database contains 1345 color fundus images acquired using three brands of commercially available fundus cameras. Each image is provided with the outlines for the optic disc (OD) and optic cup (OC) using smooth closed contours and a decision of normal versus glaucomatous by five expert ophthalmologists. In addition, segmentation ground-truths of the OD and OC are provided by fusing the expert annotations using the mean, median, majority, and Simultaneous Truth and Performance Level Estimation (STAPLE) algorithm. The performance indices show that the ground-truth agreement with the experts is the best with STAPLE algorithm, followed by majority, median, and mean. The vertical, horizontal, and area cup-to-disc ratios are provided based on the expert annotations. Image-wise glaucoma decisions are also provided based on majority voting among the experts. Chákṣu is the largest Indian-ethnicity-specific fundus image database with expert annotations and would aid in the development of artificial intelligence based glaucoma diagnostics. Nature Publishing Group UK 2023-02-03 /pmc/articles/PMC9898274/ /pubmed/36737439 http://dx.doi.org/10.1038/s41597-023-01943-4 Text en © The Author(s) 2023, corrected publication 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Data Descriptor
Kumar, J. R. Harish
Seelamantula, Chandra Sekhar
Gagan, J. H.
Kamath, Yogish S.
Kuzhuppilly, Neetha I. R.
Vivekanand, U.
Gupta, Preeti
Patil, Shilpa
Chákṣu: A glaucoma specific fundus image database
title Chákṣu: A glaucoma specific fundus image database
title_full Chákṣu: A glaucoma specific fundus image database
title_fullStr Chákṣu: A glaucoma specific fundus image database
title_full_unstemmed Chákṣu: A glaucoma specific fundus image database
title_short Chákṣu: A glaucoma specific fundus image database
title_sort chákṣu: a glaucoma specific fundus image database
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9898274/
https://www.ncbi.nlm.nih.gov/pubmed/36737439
http://dx.doi.org/10.1038/s41597-023-01943-4
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