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The mystery of the ice cold rose—Microbiome of an Arctic winter frost flower
Under very cold conditions, delicate ice‐crystal structures called frost flowers emerge on the surface of newly formed sea ice. These understudied, ephemeral structures include saline brine, organic material, inorganic nutrients, and bacterial and archaeal communities in their brine channels. Hither...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9898838/ https://www.ncbi.nlm.nih.gov/pubmed/36825884 http://dx.doi.org/10.1002/mbo3.1345 |
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author | Thiele, Stefan Vader, Anna Øvreås, Lise |
author_facet | Thiele, Stefan Vader, Anna Øvreås, Lise |
author_sort | Thiele, Stefan |
collection | PubMed |
description | Under very cold conditions, delicate ice‐crystal structures called frost flowers emerge on the surface of newly formed sea ice. These understudied, ephemeral structures include saline brine, organic material, inorganic nutrients, and bacterial and archaeal communities in their brine channels. Hitherto, only a few frost flowers have been studied during spring and these have been reported to be dominated by Rhizobia or members of the SAR11 clade. Here we report on the microbiome of frost flowers sampled during the winter and polar night in the Barents Sea. There was a distinct difference in community profile between the extracted DNA and RNA, but both were dominated by members of the SAR11 clade (78% relative abundance and 41.5% relative activity). The data further suggested the abundance and activity of Cand. Nitrosopumilus, Nitrospinia, and Nitrosomonas. Combined with the inference of marker genes based on the 16S rRNA gene data, this indicates that sulfur and nitrogen cycling are likely the major metabolism in these ephemeral structures. |
format | Online Article Text |
id | pubmed-9898838 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-98988382023-02-09 The mystery of the ice cold rose—Microbiome of an Arctic winter frost flower Thiele, Stefan Vader, Anna Øvreås, Lise Microbiologyopen Commentary Under very cold conditions, delicate ice‐crystal structures called frost flowers emerge on the surface of newly formed sea ice. These understudied, ephemeral structures include saline brine, organic material, inorganic nutrients, and bacterial and archaeal communities in their brine channels. Hitherto, only a few frost flowers have been studied during spring and these have been reported to be dominated by Rhizobia or members of the SAR11 clade. Here we report on the microbiome of frost flowers sampled during the winter and polar night in the Barents Sea. There was a distinct difference in community profile between the extracted DNA and RNA, but both were dominated by members of the SAR11 clade (78% relative abundance and 41.5% relative activity). The data further suggested the abundance and activity of Cand. Nitrosopumilus, Nitrospinia, and Nitrosomonas. Combined with the inference of marker genes based on the 16S rRNA gene data, this indicates that sulfur and nitrogen cycling are likely the major metabolism in these ephemeral structures. John Wiley and Sons Inc. 2023-02-04 /pmc/articles/PMC9898838/ /pubmed/36825884 http://dx.doi.org/10.1002/mbo3.1345 Text en © 2023 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Commentary Thiele, Stefan Vader, Anna Øvreås, Lise The mystery of the ice cold rose—Microbiome of an Arctic winter frost flower |
title | The mystery of the ice cold rose—Microbiome of an Arctic winter frost flower |
title_full | The mystery of the ice cold rose—Microbiome of an Arctic winter frost flower |
title_fullStr | The mystery of the ice cold rose—Microbiome of an Arctic winter frost flower |
title_full_unstemmed | The mystery of the ice cold rose—Microbiome of an Arctic winter frost flower |
title_short | The mystery of the ice cold rose—Microbiome of an Arctic winter frost flower |
title_sort | mystery of the ice cold rose—microbiome of an arctic winter frost flower |
topic | Commentary |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9898838/ https://www.ncbi.nlm.nih.gov/pubmed/36825884 http://dx.doi.org/10.1002/mbo3.1345 |
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