Cargando…

Selfish bacteria are active throughout the water column of the ocean

Heterotrophic bacteria in the ocean invest carbon, nitrogen, and energy in extracellular enzymes to hydrolyze large substrates to smaller sizes suitable for uptake. Since hydrolysis products produced outside of a cell may be lost to diffusion, the return on this investment is uncertain. Selfish bact...

Descripción completa

Detalles Bibliográficos
Autores principales: Giljan, Greta, Brown, Sarah, Lloyd, C. Chad, Ghobrial, Sherif, Amann, Rudolf, Arnosti, Carol
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9899235/
https://www.ncbi.nlm.nih.gov/pubmed/36739317
http://dx.doi.org/10.1038/s43705-023-00219-7
_version_ 1784882599331627008
author Giljan, Greta
Brown, Sarah
Lloyd, C. Chad
Ghobrial, Sherif
Amann, Rudolf
Arnosti, Carol
author_facet Giljan, Greta
Brown, Sarah
Lloyd, C. Chad
Ghobrial, Sherif
Amann, Rudolf
Arnosti, Carol
author_sort Giljan, Greta
collection PubMed
description Heterotrophic bacteria in the ocean invest carbon, nitrogen, and energy in extracellular enzymes to hydrolyze large substrates to smaller sizes suitable for uptake. Since hydrolysis products produced outside of a cell may be lost to diffusion, the return on this investment is uncertain. Selfish bacteria change the odds in their favor by binding, partially hydrolyzing, and transporting polysaccharides into the periplasmic space without loss of hydrolysis products. We expected selfish bacteria to be most common in the upper ocean, where phytoplankton produce abundant fresh organic matter, including complex polysaccharides. We, therefore, sampled water in the western North Atlantic Ocean at four depths from three stations differing in physiochemical conditions; these stations and depths also differed considerably in microbial community composition. To our surprise, we found that selfish bacteria are common throughout the water column of the ocean, including at depths greater than 5500 m. Selfish uptake as a strategy thus appears to be geographically—and phylogenetically—widespread. Since processing and uptake of polysaccharides require enzymes that are highly sensitive to substrate structure, the activities of these bacteria might not be reflected by measurements relying on uptake only of low molecular weight substrates. Moreover, even at the bottom of the ocean, the supply of structurally-intact polysaccharides, and therefore the return on enzymatic investment, must be sufficient to maintain these organisms.
format Online
Article
Text
id pubmed-9899235
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-98992352023-02-06 Selfish bacteria are active throughout the water column of the ocean Giljan, Greta Brown, Sarah Lloyd, C. Chad Ghobrial, Sherif Amann, Rudolf Arnosti, Carol ISME Commun Article Heterotrophic bacteria in the ocean invest carbon, nitrogen, and energy in extracellular enzymes to hydrolyze large substrates to smaller sizes suitable for uptake. Since hydrolysis products produced outside of a cell may be lost to diffusion, the return on this investment is uncertain. Selfish bacteria change the odds in their favor by binding, partially hydrolyzing, and transporting polysaccharides into the periplasmic space without loss of hydrolysis products. We expected selfish bacteria to be most common in the upper ocean, where phytoplankton produce abundant fresh organic matter, including complex polysaccharides. We, therefore, sampled water in the western North Atlantic Ocean at four depths from three stations differing in physiochemical conditions; these stations and depths also differed considerably in microbial community composition. To our surprise, we found that selfish bacteria are common throughout the water column of the ocean, including at depths greater than 5500 m. Selfish uptake as a strategy thus appears to be geographically—and phylogenetically—widespread. Since processing and uptake of polysaccharides require enzymes that are highly sensitive to substrate structure, the activities of these bacteria might not be reflected by measurements relying on uptake only of low molecular weight substrates. Moreover, even at the bottom of the ocean, the supply of structurally-intact polysaccharides, and therefore the return on enzymatic investment, must be sufficient to maintain these organisms. Nature Publishing Group UK 2023-02-04 /pmc/articles/PMC9899235/ /pubmed/36739317 http://dx.doi.org/10.1038/s43705-023-00219-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Giljan, Greta
Brown, Sarah
Lloyd, C. Chad
Ghobrial, Sherif
Amann, Rudolf
Arnosti, Carol
Selfish bacteria are active throughout the water column of the ocean
title Selfish bacteria are active throughout the water column of the ocean
title_full Selfish bacteria are active throughout the water column of the ocean
title_fullStr Selfish bacteria are active throughout the water column of the ocean
title_full_unstemmed Selfish bacteria are active throughout the water column of the ocean
title_short Selfish bacteria are active throughout the water column of the ocean
title_sort selfish bacteria are active throughout the water column of the ocean
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9899235/
https://www.ncbi.nlm.nih.gov/pubmed/36739317
http://dx.doi.org/10.1038/s43705-023-00219-7
work_keys_str_mv AT giljangreta selfishbacteriaareactivethroughoutthewatercolumnoftheocean
AT brownsarah selfishbacteriaareactivethroughoutthewatercolumnoftheocean
AT lloydcchad selfishbacteriaareactivethroughoutthewatercolumnoftheocean
AT ghobrialsherif selfishbacteriaareactivethroughoutthewatercolumnoftheocean
AT amannrudolf selfishbacteriaareactivethroughoutthewatercolumnoftheocean
AT arnosticarol selfishbacteriaareactivethroughoutthewatercolumnoftheocean