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Chalcogen bonding in the solid-state structures of 1,3-bis(benzimidazoliumyl)benzene-based chalcogen-bonding donors

1,3-Bis(benzimidazoliumyl)benzene-based chalcogen-bonding catalysts were previously successfully applied in different benchmark reactions. In one of those examples, i.e. the activation of quinolines, sulfur- and selenium-based chalcogen-bonding catalysts showed comparable properties, which is unexpe...

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Autores principales: Steinke, Tim, Engelage, Elric, Huber, Stefan M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9899511/
https://www.ncbi.nlm.nih.gov/pubmed/36739607
http://dx.doi.org/10.1107/S2053229622011536
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author Steinke, Tim
Engelage, Elric
Huber, Stefan M.
author_facet Steinke, Tim
Engelage, Elric
Huber, Stefan M.
author_sort Steinke, Tim
collection PubMed
description 1,3-Bis(benzimidazoliumyl)benzene-based chalcogen-bonding catalysts were previously successfully applied in different benchmark reactions. In one of those examples, i.e. the activation of quinolines, sulfur- and selenium-based chalcogen-bonding catalysts showed comparable properties, which is unexpected, as the selenium-con­taining catalysts should show superior catalytic properties due to the increased polarizability of selenium compared to sulfur. Herein, we present four crystal structures of the respective 1,3-bis­(benzimidazoliumyl)benzene-based chalcogen-bonding catalyst con­taining sulfur (3(S) ) and selenium (3(Se) , three forms) as Lewis acidic centres. The sulfur-con­taining catalyst shows weaker chalcogen bonding compared to its selenium analogue, as well as anion–π interactions. The selenium-based analogues, on the other hand, show stronger chalcogen-bonding motifs compared to the sulfur equivalent, de­pen­ding on the crystallization conditions, but in every case, the intermolecular interactions are comparable in strength. Other interactions, such as hydrogen bonding and anion–π, were also observed, but in the latter case, the interaction distances are longer compared to those of the sulfur-based equivalent. The solid-state structures could not further explain the high catalytic activity of the sulfur-con­taining catalysts. Therefore, a comparison of their σ-hole depths from density functional theory (DFT) gas-phase calculations was performed, which are again in line with the previously found properties in the solid-state structures.
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spelling pubmed-98995112023-02-06 Chalcogen bonding in the solid-state structures of 1,3-bis(benzimidazoliumyl)benzene-based chalcogen-bonding donors Steinke, Tim Engelage, Elric Huber, Stefan M. Acta Crystallogr C Struct Chem Halogen, Chalcogen, Pnictogen and Tetrel Bonds: Structural Chemistry and Beyond 1,3-Bis(benzimidazoliumyl)benzene-based chalcogen-bonding catalysts were previously successfully applied in different benchmark reactions. In one of those examples, i.e. the activation of quinolines, sulfur- and selenium-based chalcogen-bonding catalysts showed comparable properties, which is unexpected, as the selenium-con­taining catalysts should show superior catalytic properties due to the increased polarizability of selenium compared to sulfur. Herein, we present four crystal structures of the respective 1,3-bis­(benzimidazoliumyl)benzene-based chalcogen-bonding catalyst con­taining sulfur (3(S) ) and selenium (3(Se) , three forms) as Lewis acidic centres. The sulfur-con­taining catalyst shows weaker chalcogen bonding compared to its selenium analogue, as well as anion–π interactions. The selenium-based analogues, on the other hand, show stronger chalcogen-bonding motifs compared to the sulfur equivalent, de­pen­ding on the crystallization conditions, but in every case, the intermolecular interactions are comparable in strength. Other interactions, such as hydrogen bonding and anion–π, were also observed, but in the latter case, the interaction distances are longer compared to those of the sulfur-based equivalent. The solid-state structures could not further explain the high catalytic activity of the sulfur-con­taining catalysts. Therefore, a comparison of their σ-hole depths from density functional theory (DFT) gas-phase calculations was performed, which are again in line with the previously found properties in the solid-state structures. International Union of Crystallography 2023-01-11 /pmc/articles/PMC9899511/ /pubmed/36739607 http://dx.doi.org/10.1107/S2053229622011536 Text en © Tim Steinke et al. 2023 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Halogen, Chalcogen, Pnictogen and Tetrel Bonds: Structural Chemistry and Beyond
Steinke, Tim
Engelage, Elric
Huber, Stefan M.
Chalcogen bonding in the solid-state structures of 1,3-bis(benzimidazoliumyl)benzene-based chalcogen-bonding donors
title Chalcogen bonding in the solid-state structures of 1,3-bis(benzimidazoliumyl)benzene-based chalcogen-bonding donors
title_full Chalcogen bonding in the solid-state structures of 1,3-bis(benzimidazoliumyl)benzene-based chalcogen-bonding donors
title_fullStr Chalcogen bonding in the solid-state structures of 1,3-bis(benzimidazoliumyl)benzene-based chalcogen-bonding donors
title_full_unstemmed Chalcogen bonding in the solid-state structures of 1,3-bis(benzimidazoliumyl)benzene-based chalcogen-bonding donors
title_short Chalcogen bonding in the solid-state structures of 1,3-bis(benzimidazoliumyl)benzene-based chalcogen-bonding donors
title_sort chalcogen bonding in the solid-state structures of 1,3-bis(benzimidazoliumyl)benzene-based chalcogen-bonding donors
topic Halogen, Chalcogen, Pnictogen and Tetrel Bonds: Structural Chemistry and Beyond
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9899511/
https://www.ncbi.nlm.nih.gov/pubmed/36739607
http://dx.doi.org/10.1107/S2053229622011536
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