Cargando…
Immune‐related matrisomes are potential biomarkers to predict the prognosis and immune microenvironment of glioma patients
The extracellular matrix (ECM) plays a vital role in the progression and metastasis of glioma and is an important part of the tumor microenvironment. The matrisome is composed of ECM components and related proteins. There have been several studies on the effects of matrisomes on the glioma immune mi...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9900094/ https://www.ncbi.nlm.nih.gov/pubmed/36560848 http://dx.doi.org/10.1002/2211-5463.13541 |
_version_ | 1784882770957303808 |
---|---|
author | Yu, Hao Wang, Minjie Wang, Xuan Jiang, Xiaobing |
author_facet | Yu, Hao Wang, Minjie Wang, Xuan Jiang, Xiaobing |
author_sort | Yu, Hao |
collection | PubMed |
description | The extracellular matrix (ECM) plays a vital role in the progression and metastasis of glioma and is an important part of the tumor microenvironment. The matrisome is composed of ECM components and related proteins. There have been several studies on the effects of matrisomes on the glioma immune microenvironment, but most of these studies were performed on individual glioma immune‐related matrisomes rather than integral analysis. Hence, an overall analysis of all potential immune‐related matrisomes in gliomas is needed. Here, we divided 667 glioma patients in The Cancer Genome Atlas (TCGA) database into low, moderate, and high immune infiltration groups. Immune‐related matrisomes differentially expressed among the three groups were analyzed, and a risk signature was established. Eight immune‐related matrisomes were screened, namely, LIF, LOX, MMP9, S100A4, SRPX2, SLIT1, SMOC1, and TIMP1. Kaplan–Meier analysis, operating characteristic curve analysis, and nomogram were constructed to analyze the relationships between risk signatures and the prognosis of glioma patients. The risk signature was significantly correlated with the overall survival of glioma patients. Both high‐ and low‐risk signatures were also associated with some immune checkpoints. In addition, analysis of somatic mutations and anti‐PD1/L1 immunotherapy responses in the high‐ and low‐risk groups showed that the high‐risk group had worse prognosis and a higher response to anti‐PD1/L1 immunotherapy. Our analysis of immune‐related matrisomes may improve understanding of the characteristics of the glioma immune microenvironment and provide direction for glioma immunotherapy development in the future. |
format | Online Article Text |
id | pubmed-9900094 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99000942023-02-09 Immune‐related matrisomes are potential biomarkers to predict the prognosis and immune microenvironment of glioma patients Yu, Hao Wang, Minjie Wang, Xuan Jiang, Xiaobing FEBS Open Bio Research Articles The extracellular matrix (ECM) plays a vital role in the progression and metastasis of glioma and is an important part of the tumor microenvironment. The matrisome is composed of ECM components and related proteins. There have been several studies on the effects of matrisomes on the glioma immune microenvironment, but most of these studies were performed on individual glioma immune‐related matrisomes rather than integral analysis. Hence, an overall analysis of all potential immune‐related matrisomes in gliomas is needed. Here, we divided 667 glioma patients in The Cancer Genome Atlas (TCGA) database into low, moderate, and high immune infiltration groups. Immune‐related matrisomes differentially expressed among the three groups were analyzed, and a risk signature was established. Eight immune‐related matrisomes were screened, namely, LIF, LOX, MMP9, S100A4, SRPX2, SLIT1, SMOC1, and TIMP1. Kaplan–Meier analysis, operating characteristic curve analysis, and nomogram were constructed to analyze the relationships between risk signatures and the prognosis of glioma patients. The risk signature was significantly correlated with the overall survival of glioma patients. Both high‐ and low‐risk signatures were also associated with some immune checkpoints. In addition, analysis of somatic mutations and anti‐PD1/L1 immunotherapy responses in the high‐ and low‐risk groups showed that the high‐risk group had worse prognosis and a higher response to anti‐PD1/L1 immunotherapy. Our analysis of immune‐related matrisomes may improve understanding of the characteristics of the glioma immune microenvironment and provide direction for glioma immunotherapy development in the future. John Wiley and Sons Inc. 2022-12-30 /pmc/articles/PMC9900094/ /pubmed/36560848 http://dx.doi.org/10.1002/2211-5463.13541 Text en © 2022 The Authors. FEBS Open Bio published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Yu, Hao Wang, Minjie Wang, Xuan Jiang, Xiaobing Immune‐related matrisomes are potential biomarkers to predict the prognosis and immune microenvironment of glioma patients |
title | Immune‐related matrisomes are potential biomarkers to predict the prognosis and immune microenvironment of glioma patients |
title_full | Immune‐related matrisomes are potential biomarkers to predict the prognosis and immune microenvironment of glioma patients |
title_fullStr | Immune‐related matrisomes are potential biomarkers to predict the prognosis and immune microenvironment of glioma patients |
title_full_unstemmed | Immune‐related matrisomes are potential biomarkers to predict the prognosis and immune microenvironment of glioma patients |
title_short | Immune‐related matrisomes are potential biomarkers to predict the prognosis and immune microenvironment of glioma patients |
title_sort | immune‐related matrisomes are potential biomarkers to predict the prognosis and immune microenvironment of glioma patients |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9900094/ https://www.ncbi.nlm.nih.gov/pubmed/36560848 http://dx.doi.org/10.1002/2211-5463.13541 |
work_keys_str_mv | AT yuhao immunerelatedmatrisomesarepotentialbiomarkerstopredicttheprognosisandimmunemicroenvironmentofgliomapatients AT wangminjie immunerelatedmatrisomesarepotentialbiomarkerstopredicttheprognosisandimmunemicroenvironmentofgliomapatients AT wangxuan immunerelatedmatrisomesarepotentialbiomarkerstopredicttheprognosisandimmunemicroenvironmentofgliomapatients AT jiangxiaobing immunerelatedmatrisomesarepotentialbiomarkerstopredicttheprognosisandimmunemicroenvironmentofgliomapatients |