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The genetic landscape of autosomal dominant polycystic kidney disease in Kuwait

BACKGROUND: Autosomal dominant polycystic kidney disease (ADPKD) is the most common renal monogenic disease, characterized by bilateral accumulation of renal fluid-filled cysts leading to progressive renal volume enlargement and gradual impairment of kidney function, often resulting in end-stage ren...

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Autores principales: Ali, Hamad, Naim, Medhat, Senum, Sarah R, AlSahow, Ali, Bahbahani, Yousif, Abu-Farha, Mohamed, Abubaker, Jehad, Mohammad, Anwar, Al-Hunayan, Adel, Asbeutah, Akram M, Zayed, Mohamed, Devarajan, Sriraman, Hussain, Naser, John, Sumi Elsa, Channanath, Arshad, Thanaraj, Thangavel Alphonse, Al-Ali, Mohammad, AlMousawi, Mustafa, Al-Mulla, Fahd, Harris, Peter C
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9900584/
https://www.ncbi.nlm.nih.gov/pubmed/36755831
http://dx.doi.org/10.1093/ckj/sfac236
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author Ali, Hamad
Naim, Medhat
Senum, Sarah R
AlSahow, Ali
Bahbahani, Yousif
Abu-Farha, Mohamed
Abubaker, Jehad
Mohammad, Anwar
Al-Hunayan, Adel
Asbeutah, Akram M
Zayed, Mohamed
Devarajan, Sriraman
Hussain, Naser
John, Sumi Elsa
Channanath, Arshad
Thanaraj, Thangavel Alphonse
Al-Ali, Mohammad
AlMousawi, Mustafa
Al-Mulla, Fahd
Harris, Peter C
author_facet Ali, Hamad
Naim, Medhat
Senum, Sarah R
AlSahow, Ali
Bahbahani, Yousif
Abu-Farha, Mohamed
Abubaker, Jehad
Mohammad, Anwar
Al-Hunayan, Adel
Asbeutah, Akram M
Zayed, Mohamed
Devarajan, Sriraman
Hussain, Naser
John, Sumi Elsa
Channanath, Arshad
Thanaraj, Thangavel Alphonse
Al-Ali, Mohammad
AlMousawi, Mustafa
Al-Mulla, Fahd
Harris, Peter C
author_sort Ali, Hamad
collection PubMed
description BACKGROUND: Autosomal dominant polycystic kidney disease (ADPKD) is the most common renal monogenic disease, characterized by bilateral accumulation of renal fluid-filled cysts leading to progressive renal volume enlargement and gradual impairment of kidney function, often resulting in end-stage renal disease. Kuwait could provide valuable genetic insights about ADPKD, including intrafamilial phenotypic variation, given its large household size. This study aims to provide a comprehensive description of the pathogenic variants linked to ADPKD in the Kuwaiti population using multiple genetic analysis modalities and to describe and analyse the ADPKD phenotypic spectrum in terms of kidney function, kidney volume and renal survival. METHODS: A total of 126 ADPKD patients from 11 multiplex families and 25 singletons were recruited into the study. A combination of targeted next-generation sequencing (tNGS), long-range polymerase chain reaction, Sanger sequencing and multiplex ligation-dependent probe amplification were utilized for genetic diagnosis. Clinical evaluation was conducted through renal function testing and ultrasonographic kidney volume analysis. RESULTS: We identified 29 ADPKD pathogenic mutations from 36 families achieving an overall molecular genetic diagnostic rate of 112/126 (88.9%), including 29/36 (80.6%) in families. A total of 28/36 (77.8%) families had pathogenic mutations in PKD1, of which 17/28 (60.7%) were truncating, and 1/36 (2.8%) had a pathogenic variant in the IFT140 gene. A total of 20/29 (69%) of the identified ADPKD mutations were novel and described for the first time, including a TSC2-PKD1 contiguous syndrome. Clinical analysis indicated that genetically unresolved ADPKD cases had no apparent association between kidney volume and age. CONCLUSION: We describe for the first time the genetic landscape of ADPKD in Kuwait. The observed genetic heterogeneity underlining ADPKD along with the wide phenotypic spectrum reveal the level of complexity in disease pathophysiology. ADPKD genetic testing could improve the care of patients through improved disease prognostication, guided treatment and genetic counselling. However, to fulfil the potential of genetic testing, it is important to overcome the hurdle of genetically unresolved ADPKD cases.
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spelling pubmed-99005842023-02-07 The genetic landscape of autosomal dominant polycystic kidney disease in Kuwait Ali, Hamad Naim, Medhat Senum, Sarah R AlSahow, Ali Bahbahani, Yousif Abu-Farha, Mohamed Abubaker, Jehad Mohammad, Anwar Al-Hunayan, Adel Asbeutah, Akram M Zayed, Mohamed Devarajan, Sriraman Hussain, Naser John, Sumi Elsa Channanath, Arshad Thanaraj, Thangavel Alphonse Al-Ali, Mohammad AlMousawi, Mustafa Al-Mulla, Fahd Harris, Peter C Clin Kidney J Original Article BACKGROUND: Autosomal dominant polycystic kidney disease (ADPKD) is the most common renal monogenic disease, characterized by bilateral accumulation of renal fluid-filled cysts leading to progressive renal volume enlargement and gradual impairment of kidney function, often resulting in end-stage renal disease. Kuwait could provide valuable genetic insights about ADPKD, including intrafamilial phenotypic variation, given its large household size. This study aims to provide a comprehensive description of the pathogenic variants linked to ADPKD in the Kuwaiti population using multiple genetic analysis modalities and to describe and analyse the ADPKD phenotypic spectrum in terms of kidney function, kidney volume and renal survival. METHODS: A total of 126 ADPKD patients from 11 multiplex families and 25 singletons were recruited into the study. A combination of targeted next-generation sequencing (tNGS), long-range polymerase chain reaction, Sanger sequencing and multiplex ligation-dependent probe amplification were utilized for genetic diagnosis. Clinical evaluation was conducted through renal function testing and ultrasonographic kidney volume analysis. RESULTS: We identified 29 ADPKD pathogenic mutations from 36 families achieving an overall molecular genetic diagnostic rate of 112/126 (88.9%), including 29/36 (80.6%) in families. A total of 28/36 (77.8%) families had pathogenic mutations in PKD1, of which 17/28 (60.7%) were truncating, and 1/36 (2.8%) had a pathogenic variant in the IFT140 gene. A total of 20/29 (69%) of the identified ADPKD mutations were novel and described for the first time, including a TSC2-PKD1 contiguous syndrome. Clinical analysis indicated that genetically unresolved ADPKD cases had no apparent association between kidney volume and age. CONCLUSION: We describe for the first time the genetic landscape of ADPKD in Kuwait. The observed genetic heterogeneity underlining ADPKD along with the wide phenotypic spectrum reveal the level of complexity in disease pathophysiology. ADPKD genetic testing could improve the care of patients through improved disease prognostication, guided treatment and genetic counselling. However, to fulfil the potential of genetic testing, it is important to overcome the hurdle of genetically unresolved ADPKD cases. Oxford University Press 2022-10-28 /pmc/articles/PMC9900584/ /pubmed/36755831 http://dx.doi.org/10.1093/ckj/sfac236 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of the ERA. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Original Article
Ali, Hamad
Naim, Medhat
Senum, Sarah R
AlSahow, Ali
Bahbahani, Yousif
Abu-Farha, Mohamed
Abubaker, Jehad
Mohammad, Anwar
Al-Hunayan, Adel
Asbeutah, Akram M
Zayed, Mohamed
Devarajan, Sriraman
Hussain, Naser
John, Sumi Elsa
Channanath, Arshad
Thanaraj, Thangavel Alphonse
Al-Ali, Mohammad
AlMousawi, Mustafa
Al-Mulla, Fahd
Harris, Peter C
The genetic landscape of autosomal dominant polycystic kidney disease in Kuwait
title The genetic landscape of autosomal dominant polycystic kidney disease in Kuwait
title_full The genetic landscape of autosomal dominant polycystic kidney disease in Kuwait
title_fullStr The genetic landscape of autosomal dominant polycystic kidney disease in Kuwait
title_full_unstemmed The genetic landscape of autosomal dominant polycystic kidney disease in Kuwait
title_short The genetic landscape of autosomal dominant polycystic kidney disease in Kuwait
title_sort genetic landscape of autosomal dominant polycystic kidney disease in kuwait
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9900584/
https://www.ncbi.nlm.nih.gov/pubmed/36755831
http://dx.doi.org/10.1093/ckj/sfac236
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