Cargando…
HAT: de novo variant calling for highly accurate short-read and long-read sequencing data
MOTIVATION: de novo variant (DNV) calling is challenging from parent-child sequenced trio data. We developed Hare And Tortoise (HAT) to work as an automated workflow to detect DNVs in highly accurate short-read and long-read sequencing data. Reliable detection of DNVs is important for human genetics...
Autores principales: | Ng, Jeffrey K., Turner, Tychele N. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9900919/ https://www.ncbi.nlm.nih.gov/pubmed/36747667 http://dx.doi.org/10.1101/2023.01.27.525940 |
Ejemplares similares
-
Local read haplotagging enables accurate long-read small variant calling
por: Kolesnikov, Alexey, et al.
Publicado: (2023) -
High Coverage Highly Accurate Long-Read Sequencing of a Mouse Neuronal Cell Line Using the PacBio Revio Sequencer
por: Manuel, Juana G., et al.
Publicado: (2023) -
HAT: haplotype assembly tool using short and error-prone long reads
por: Shirali Hossein Zade, Ramin, et al.
Publicado: (2022) -
Longshot enables accurate variant calling in diploid genomes from single-molecule long read sequencing
por: Edge, Peter, et al.
Publicado: (2019) -
Dysgu: efficient structural variant calling using short or long reads
por: Cleal, Kez, et al.
Publicado: (2022)