Cargando…

Meta-analysis of association between c.963A>G single-nucleotide polymorphism on BMP15 gene and litter size in goats

Litter size is an important economic trait in the goat industry. Previous studies on the bone morphogenetic protein 15 (BMP15) gene detected some single-nucleotide polymorphisms (SNPs) such as c.963A [Formula: see text] G that were associated with an increase in ovulation rate and litter size. The a...

Descripción completa

Detalles Bibliográficos
Autores principales: Zergani, Emel, Rashidi, Amir, Rostamzadeh, Jalal, Razmkabir, Mohammad, Tetens, Jens
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Copernicus GmbH 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9901516/
https://www.ncbi.nlm.nih.gov/pubmed/36755958
http://dx.doi.org/10.5194/aab-65-309-2022
_version_ 1784883042052997120
author Zergani, Emel
Rashidi, Amir
Rostamzadeh, Jalal
Razmkabir, Mohammad
Tetens, Jens
author_facet Zergani, Emel
Rashidi, Amir
Rostamzadeh, Jalal
Razmkabir, Mohammad
Tetens, Jens
author_sort Zergani, Emel
collection PubMed
description Litter size is an important economic trait in the goat industry. Previous studies on the bone morphogenetic protein 15 (BMP15) gene detected some single-nucleotide polymorphisms (SNPs) such as c.963A [Formula: see text] G that were associated with an increase in ovulation rate and litter size. The aim of this study was to conduct a meta-analysis on the effect of this polymorphism on litter size. We gathered and pooled data from five eligible published studies. To investigate the effect of c.963A [Formula: see text] G on litter size, we utilized four different genetic models assuming dominant (GG  [Formula: see text]  GA vs. AA), recessive (GG vs. GA  [Formula: see text]  AA), additive (GG vs. AA) and co-dominant (GG  [Formula: see text]  AA vs. GA) model of inheritance. Data were analyzed under random-effects models based on the [Formula: see text] value. Furthermore, sensitivity analysis was carried out to validate the stability of results. The results showed that the c.963A [Formula: see text] G polymorphism is associated with litter size when applying a dominant model (standardized mean difference (SMD) is 0.815, 95 % CI [0.170, 1.461], [Formula: see text]  value  [Formula: see text]  0.013) and also with an additive model (SMD  [Formula: see text]  0.755, 95 % CI [0.111, 1.400], [Formula: see text]  value  [Formula: see text]  0.022). However, the effect of c.963A [Formula: see text] G polymorphism was not significant under recessive (SMD  [Formula: see text]  0.186, 95 % CI [ [Formula: see text] 0.195, 4.259], [Formula: see text]  value  [Formula: see text]  0.339) and co-dominant (SMD  [Formula: see text]   [Formula: see text] 0.119, 95 % CI [ [Formula: see text] 0.525, 0.288], [Formula: see text]  value  [Formula: see text]  0.568) models. Sensitivity analysis demonstrated that dropping studies with wide confidence intervals affects overall results under the assumption of an additive model. The meta-analysis results revealed that the AA genotype could be positively connected with litter size in goats.
format Online
Article
Text
id pubmed-9901516
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Copernicus GmbH
record_format MEDLINE/PubMed
spelling pubmed-99015162023-02-07 Meta-analysis of association between c.963A>G single-nucleotide polymorphism on BMP15 gene and litter size in goats Zergani, Emel Rashidi, Amir Rostamzadeh, Jalal Razmkabir, Mohammad Tetens, Jens Arch Anim Breed Original Study Litter size is an important economic trait in the goat industry. Previous studies on the bone morphogenetic protein 15 (BMP15) gene detected some single-nucleotide polymorphisms (SNPs) such as c.963A [Formula: see text] G that were associated with an increase in ovulation rate and litter size. The aim of this study was to conduct a meta-analysis on the effect of this polymorphism on litter size. We gathered and pooled data from five eligible published studies. To investigate the effect of c.963A [Formula: see text] G on litter size, we utilized four different genetic models assuming dominant (GG  [Formula: see text]  GA vs. AA), recessive (GG vs. GA  [Formula: see text]  AA), additive (GG vs. AA) and co-dominant (GG  [Formula: see text]  AA vs. GA) model of inheritance. Data were analyzed under random-effects models based on the [Formula: see text] value. Furthermore, sensitivity analysis was carried out to validate the stability of results. The results showed that the c.963A [Formula: see text] G polymorphism is associated with litter size when applying a dominant model (standardized mean difference (SMD) is 0.815, 95 % CI [0.170, 1.461], [Formula: see text]  value  [Formula: see text]  0.013) and also with an additive model (SMD  [Formula: see text]  0.755, 95 % CI [0.111, 1.400], [Formula: see text]  value  [Formula: see text]  0.022). However, the effect of c.963A [Formula: see text] G polymorphism was not significant under recessive (SMD  [Formula: see text]  0.186, 95 % CI [ [Formula: see text] 0.195, 4.259], [Formula: see text]  value  [Formula: see text]  0.339) and co-dominant (SMD  [Formula: see text]   [Formula: see text] 0.119, 95 % CI [ [Formula: see text] 0.525, 0.288], [Formula: see text]  value  [Formula: see text]  0.568) models. Sensitivity analysis demonstrated that dropping studies with wide confidence intervals affects overall results under the assumption of an additive model. The meta-analysis results revealed that the AA genotype could be positively connected with litter size in goats. Copernicus GmbH 2022-08-12 /pmc/articles/PMC9901516/ /pubmed/36755958 http://dx.doi.org/10.5194/aab-65-309-2022 Text en Copyright: © 2022 Emel Zergani et al. https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit https://creativecommons.org/licenses/by/4.0/
spellingShingle Original Study
Zergani, Emel
Rashidi, Amir
Rostamzadeh, Jalal
Razmkabir, Mohammad
Tetens, Jens
Meta-analysis of association between c.963A>G single-nucleotide polymorphism on BMP15 gene and litter size in goats
title Meta-analysis of association between c.963A>G single-nucleotide polymorphism on BMP15 gene and litter size in goats
title_full Meta-analysis of association between c.963A>G single-nucleotide polymorphism on BMP15 gene and litter size in goats
title_fullStr Meta-analysis of association between c.963A>G single-nucleotide polymorphism on BMP15 gene and litter size in goats
title_full_unstemmed Meta-analysis of association between c.963A>G single-nucleotide polymorphism on BMP15 gene and litter size in goats
title_short Meta-analysis of association between c.963A>G single-nucleotide polymorphism on BMP15 gene and litter size in goats
title_sort meta-analysis of association between c.963a>g single-nucleotide polymorphism on bmp15 gene and litter size in goats
topic Original Study
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9901516/
https://www.ncbi.nlm.nih.gov/pubmed/36755958
http://dx.doi.org/10.5194/aab-65-309-2022
work_keys_str_mv AT zerganiemel metaanalysisofassociationbetweenc963agsinglenucleotidepolymorphismonbmp15geneandlittersizeingoats
AT rashidiamir metaanalysisofassociationbetweenc963agsinglenucleotidepolymorphismonbmp15geneandlittersizeingoats
AT rostamzadehjalal metaanalysisofassociationbetweenc963agsinglenucleotidepolymorphismonbmp15geneandlittersizeingoats
AT razmkabirmohammad metaanalysisofassociationbetweenc963agsinglenucleotidepolymorphismonbmp15geneandlittersizeingoats
AT tetensjens metaanalysisofassociationbetweenc963agsinglenucleotidepolymorphismonbmp15geneandlittersizeingoats