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Computational investigation on the antioxidant activities and on the M(pro) SARS-CoV-2 non-covalent inhibition of isorhamnetin
In the present work, we report a computational study on some important chemical properties of the flavonoid isorhamnetin, used in traditional medicine in many countries. In the course of the study we determined the acid-base equilibria in aqueous solution, the possible reaction pathways with the •OO...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9902383/ https://www.ncbi.nlm.nih.gov/pubmed/36762196 http://dx.doi.org/10.3389/fchem.2023.1122880 |
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author | Spiegel, Maciej Ciardullo, Giada Marino, Tiziana Russo, Nino |
author_facet | Spiegel, Maciej Ciardullo, Giada Marino, Tiziana Russo, Nino |
author_sort | Spiegel, Maciej |
collection | PubMed |
description | In the present work, we report a computational study on some important chemical properties of the flavonoid isorhamnetin, used in traditional medicine in many countries. In the course of the study we determined the acid-base equilibria in aqueous solution, the possible reaction pathways with the •OOH radical and the corresponding kinetic constants, the complexing capacity of copper ions, and the reduction of these complexes by reducing agents such as superoxide and ascorbic anion by using density functional level of theory Density Functional Theory. Finally, the non-covalent inhibition ability of the SARS-CoV-2 main protease enzyme by isorhamnetin was examined by molecular dynamics (MD) and docking investigation. |
format | Online Article Text |
id | pubmed-9902383 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99023832023-02-08 Computational investigation on the antioxidant activities and on the M(pro) SARS-CoV-2 non-covalent inhibition of isorhamnetin Spiegel, Maciej Ciardullo, Giada Marino, Tiziana Russo, Nino Front Chem Chemistry In the present work, we report a computational study on some important chemical properties of the flavonoid isorhamnetin, used in traditional medicine in many countries. In the course of the study we determined the acid-base equilibria in aqueous solution, the possible reaction pathways with the •OOH radical and the corresponding kinetic constants, the complexing capacity of copper ions, and the reduction of these complexes by reducing agents such as superoxide and ascorbic anion by using density functional level of theory Density Functional Theory. Finally, the non-covalent inhibition ability of the SARS-CoV-2 main protease enzyme by isorhamnetin was examined by molecular dynamics (MD) and docking investigation. Frontiers Media S.A. 2023-01-24 /pmc/articles/PMC9902383/ /pubmed/36762196 http://dx.doi.org/10.3389/fchem.2023.1122880 Text en Copyright © 2023 Spiegel, Ciardullo, Marino and Russo. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Chemistry Spiegel, Maciej Ciardullo, Giada Marino, Tiziana Russo, Nino Computational investigation on the antioxidant activities and on the M(pro) SARS-CoV-2 non-covalent inhibition of isorhamnetin |
title | Computational investigation on the antioxidant activities and on the M(pro) SARS-CoV-2 non-covalent inhibition of isorhamnetin |
title_full | Computational investigation on the antioxidant activities and on the M(pro) SARS-CoV-2 non-covalent inhibition of isorhamnetin |
title_fullStr | Computational investigation on the antioxidant activities and on the M(pro) SARS-CoV-2 non-covalent inhibition of isorhamnetin |
title_full_unstemmed | Computational investigation on the antioxidant activities and on the M(pro) SARS-CoV-2 non-covalent inhibition of isorhamnetin |
title_short | Computational investigation on the antioxidant activities and on the M(pro) SARS-CoV-2 non-covalent inhibition of isorhamnetin |
title_sort | computational investigation on the antioxidant activities and on the m(pro) sars-cov-2 non-covalent inhibition of isorhamnetin |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9902383/ https://www.ncbi.nlm.nih.gov/pubmed/36762196 http://dx.doi.org/10.3389/fchem.2023.1122880 |
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