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Deep learning model integrating positron emission tomography and clinical data for prognosis prediction in non-small cell lung cancer patients

BACKGROUND: Lung cancer is the leading cause of cancer-related deaths worldwide. The majority of lung cancers are non-small cell lung cancer (NSCLC), accounting for approximately 85% of all lung cancer types. The Cox proportional hazards model (CPH), which is the standard method for survival analysi...

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Autores principales: Oh, Seungwon, Kang, Sae-Ryung, Oh, In-Jae, Kim, Min-Soo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9903435/
https://www.ncbi.nlm.nih.gov/pubmed/36747153
http://dx.doi.org/10.1186/s12859-023-05160-z
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author Oh, Seungwon
Kang, Sae-Ryung
Oh, In-Jae
Kim, Min-Soo
author_facet Oh, Seungwon
Kang, Sae-Ryung
Oh, In-Jae
Kim, Min-Soo
author_sort Oh, Seungwon
collection PubMed
description BACKGROUND: Lung cancer is the leading cause of cancer-related deaths worldwide. The majority of lung cancers are non-small cell lung cancer (NSCLC), accounting for approximately 85% of all lung cancer types. The Cox proportional hazards model (CPH), which is the standard method for survival analysis, has several limitations. The purpose of our study was to improve survival prediction in patients with NSCLC by incorporating prognostic information from F-18 fluorodeoxyglucose positron emission tomography (FDG PET) images into a traditional survival prediction model using clinical data. RESULTS: The multimodal deep learning model showed the best performance, with a C-index and mean absolute error of 0.756 and 399 days under a five-fold cross-validation, respectively, followed by ResNet3D for PET (0.749 and 405 days) and CPH for clinical data (0.747 and 583 days). CONCLUSION: The proposed deep learning-based integrative model combining the two modalities improved the survival prediction in patients with NSCLC.
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spelling pubmed-99034352023-02-08 Deep learning model integrating positron emission tomography and clinical data for prognosis prediction in non-small cell lung cancer patients Oh, Seungwon Kang, Sae-Ryung Oh, In-Jae Kim, Min-Soo BMC Bioinformatics Research BACKGROUND: Lung cancer is the leading cause of cancer-related deaths worldwide. The majority of lung cancers are non-small cell lung cancer (NSCLC), accounting for approximately 85% of all lung cancer types. The Cox proportional hazards model (CPH), which is the standard method for survival analysis, has several limitations. The purpose of our study was to improve survival prediction in patients with NSCLC by incorporating prognostic information from F-18 fluorodeoxyglucose positron emission tomography (FDG PET) images into a traditional survival prediction model using clinical data. RESULTS: The multimodal deep learning model showed the best performance, with a C-index and mean absolute error of 0.756 and 399 days under a five-fold cross-validation, respectively, followed by ResNet3D for PET (0.749 and 405 days) and CPH for clinical data (0.747 and 583 days). CONCLUSION: The proposed deep learning-based integrative model combining the two modalities improved the survival prediction in patients with NSCLC. BioMed Central 2023-02-06 /pmc/articles/PMC9903435/ /pubmed/36747153 http://dx.doi.org/10.1186/s12859-023-05160-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Oh, Seungwon
Kang, Sae-Ryung
Oh, In-Jae
Kim, Min-Soo
Deep learning model integrating positron emission tomography and clinical data for prognosis prediction in non-small cell lung cancer patients
title Deep learning model integrating positron emission tomography and clinical data for prognosis prediction in non-small cell lung cancer patients
title_full Deep learning model integrating positron emission tomography and clinical data for prognosis prediction in non-small cell lung cancer patients
title_fullStr Deep learning model integrating positron emission tomography and clinical data for prognosis prediction in non-small cell lung cancer patients
title_full_unstemmed Deep learning model integrating positron emission tomography and clinical data for prognosis prediction in non-small cell lung cancer patients
title_short Deep learning model integrating positron emission tomography and clinical data for prognosis prediction in non-small cell lung cancer patients
title_sort deep learning model integrating positron emission tomography and clinical data for prognosis prediction in non-small cell lung cancer patients
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9903435/
https://www.ncbi.nlm.nih.gov/pubmed/36747153
http://dx.doi.org/10.1186/s12859-023-05160-z
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