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Global Biobank Meta-analysis Initiative: Powering genetic discovery across human disease

Biobanks facilitate genome-wide association studies (GWASs), which have mapped genomic loci across a range of human diseases and traits. However, most biobanks are primarily composed of individuals of European ancestry. We introduce the Global Biobank Meta-analysis Initiative (GBMI)—a collaborative...

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Autores principales: Zhou, Wei, Kanai, Masahiro, Wu, Kuan-Han H., Rasheed, Humaira, Tsuo, Kristin, Hirbo, Jibril B., Wang, Ying, Bhattacharya, Arjun, Zhao, Huiling, Namba, Shinichi, Surakka, Ida, Wolford, Brooke N., Lo Faro, Valeria, Lopera-Maya, Esteban A., Läll, Kristi, Favé, Marie-Julie, Partanen, Juulia J., Chapman, Sinéad B., Karjalainen, Juha, Kurki, Mitja, Maasha, Mutaamba, Brumpton, Ben M., Chavan, Sameer, Chen, Tzu-Ting, Daya, Michelle, Ding, Yi, Feng, Yen-Chen A., Guare, Lindsay A., Gignoux, Christopher R., Graham, Sarah E., Hornsby, Whitney E., Ingold, Nathan, Ismail, Said I., Johnson, Ruth, Laisk, Triin, Lin, Kuang, Lv, Jun, Millwood, Iona Y., Moreno-Grau, Sonia, Nam, Kisung, Palta, Priit, Pandit, Anita, Preuss, Michael H., Saad, Chadi, Setia-Verma, Shefali, Thorsteinsdottir, Unnur, Uzunovic, Jasmina, Verma, Anurag, Zawistowski, Matthew, Zhong, Xue, Afifi, Nahla, Al-Dabhani, Kawthar M., Al Thani, Asma, Bradford, Yuki, Campbell, Archie, Crooks, Kristy, de Bock, Geertruida H., Damrauer, Scott M., Douville, Nicholas J., Finer, Sarah, Fritsche, Lars G., Fthenou, Eleni, Gonzalez-Arroyo, Gilberto, Griffiths, Christopher J., Guo, Yu, Hunt, Karen A., Ioannidis, Alexander, Jansonius, Nomdo M., Konuma, Takahiro, Lee, Ming Ta Michael, Lopez-Pineda, Arturo, Matsuda, Yuta, Marioni, Riccardo E., Moatamed, Babak, Nava-Aguilar, Marco A., Numakura, Kensuke, Patil, Snehal, Rafaels, Nicholas, Richmond, Anne, Rojas-Muñoz, Agustin, Shortt, Jonathan A., Straub, Peter, Tao, Ran, Vanderwerff, Brett, Vernekar, Manvi, Veturi, Yogasudha, Barnes, Kathleen C., Boezen, Marike, Chen, Zhengming, Chen, Chia-Yen, Cho, Judy, Smith, George Davey, Finucane, Hilary K., Franke, Lude, Gamazon, Eric R., Ganna, Andrea, Gaunt, Tom R., Ge, Tian, Huang, Hailiang, Huffman, Jennifer, Katsanis, Nicholas, Koskela, Jukka T., Lajonchere, Clara, Law, Matthew H., Li, Liming, Lindgren, Cecilia M., Loos, Ruth J.F., MacGregor, Stuart, Matsuda, Koichi, Olsen, Catherine M., Porteous, David J., Shavit, Jordan A., Snieder, Harold, Takano, Tomohiro, Trembath, Richard C., Vonk, Judith M., Whiteman, David C., Wicks, Stephen J., Wijmenga, Cisca, Wright, John, Zheng, Jie, Zhou, Xiang, Awadalla, Philip, Boehnke, Michael, Bustamante, Carlos D., Cox, Nancy J., Fatumo, Segun, Geschwind, Daniel H., Hayward, Caroline, Hveem, Kristian, Kenny, Eimear E., Lee, Seunggeun, Lin, Yen-Feng, Mbarek, Hamdi, Mägi, Reedik, Martin, Hilary C., Medland, Sarah E., Okada, Yukinori, Palotie, Aarno V., Pasaniuc, Bogdan, Rader, Daniel J., Ritchie, Marylyn D., Sanna, Serena, Smoller, Jordan W., Stefansson, Kari, van Heel, David A., Walters, Robin G., Zöllner, Sebastian, Martin, Alicia R., Willer, Cristen J., Daly, Mark J., Neale, Benjamin M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9903716/
https://www.ncbi.nlm.nih.gov/pubmed/36777996
http://dx.doi.org/10.1016/j.xgen.2022.100192
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author Zhou, Wei
Kanai, Masahiro
Wu, Kuan-Han H.
Rasheed, Humaira
Tsuo, Kristin
Hirbo, Jibril B.
Wang, Ying
Bhattacharya, Arjun
Zhao, Huiling
Namba, Shinichi
Surakka, Ida
Wolford, Brooke N.
Lo Faro, Valeria
Lopera-Maya, Esteban A.
Läll, Kristi
Favé, Marie-Julie
Partanen, Juulia J.
Chapman, Sinéad B.
Karjalainen, Juha
Kurki, Mitja
Maasha, Mutaamba
Brumpton, Ben M.
Chavan, Sameer
Chen, Tzu-Ting
Daya, Michelle
Ding, Yi
Feng, Yen-Chen A.
Guare, Lindsay A.
Gignoux, Christopher R.
Graham, Sarah E.
Hornsby, Whitney E.
Ingold, Nathan
Ismail, Said I.
Johnson, Ruth
Laisk, Triin
Lin, Kuang
Lv, Jun
Millwood, Iona Y.
Moreno-Grau, Sonia
Nam, Kisung
Palta, Priit
Pandit, Anita
Preuss, Michael H.
Saad, Chadi
Setia-Verma, Shefali
Thorsteinsdottir, Unnur
Uzunovic, Jasmina
Verma, Anurag
Zawistowski, Matthew
Zhong, Xue
Afifi, Nahla
Al-Dabhani, Kawthar M.
Al Thani, Asma
Bradford, Yuki
Campbell, Archie
Crooks, Kristy
de Bock, Geertruida H.
Damrauer, Scott M.
Douville, Nicholas J.
Finer, Sarah
Fritsche, Lars G.
Fthenou, Eleni
Gonzalez-Arroyo, Gilberto
Griffiths, Christopher J.
Guo, Yu
Hunt, Karen A.
Ioannidis, Alexander
Jansonius, Nomdo M.
Konuma, Takahiro
Lee, Ming Ta Michael
Lopez-Pineda, Arturo
Matsuda, Yuta
Marioni, Riccardo E.
Moatamed, Babak
Nava-Aguilar, Marco A.
Numakura, Kensuke
Patil, Snehal
Rafaels, Nicholas
Richmond, Anne
Rojas-Muñoz, Agustin
Shortt, Jonathan A.
Straub, Peter
Tao, Ran
Vanderwerff, Brett
Vernekar, Manvi
Veturi, Yogasudha
Barnes, Kathleen C.
Boezen, Marike
Chen, Zhengming
Chen, Chia-Yen
Cho, Judy
Smith, George Davey
Finucane, Hilary K.
Franke, Lude
Gamazon, Eric R.
Ganna, Andrea
Gaunt, Tom R.
Ge, Tian
Huang, Hailiang
Huffman, Jennifer
Katsanis, Nicholas
Koskela, Jukka T.
Lajonchere, Clara
Law, Matthew H.
Li, Liming
Lindgren, Cecilia M.
Loos, Ruth J.F.
MacGregor, Stuart
Matsuda, Koichi
Olsen, Catherine M.
Porteous, David J.
Shavit, Jordan A.
Snieder, Harold
Takano, Tomohiro
Trembath, Richard C.
Vonk, Judith M.
Whiteman, David C.
Wicks, Stephen J.
Wijmenga, Cisca
Wright, John
Zheng, Jie
Zhou, Xiang
Awadalla, Philip
Boehnke, Michael
Bustamante, Carlos D.
Cox, Nancy J.
Fatumo, Segun
Geschwind, Daniel H.
Hayward, Caroline
Hveem, Kristian
Kenny, Eimear E.
Lee, Seunggeun
Lin, Yen-Feng
Mbarek, Hamdi
Mägi, Reedik
Martin, Hilary C.
Medland, Sarah E.
Okada, Yukinori
Palotie, Aarno V.
Pasaniuc, Bogdan
Rader, Daniel J.
Ritchie, Marylyn D.
Sanna, Serena
Smoller, Jordan W.
Stefansson, Kari
van Heel, David A.
Walters, Robin G.
Zöllner, Sebastian
Martin, Alicia R.
Willer, Cristen J.
Daly, Mark J.
Neale, Benjamin M.
author_facet Zhou, Wei
Kanai, Masahiro
Wu, Kuan-Han H.
Rasheed, Humaira
Tsuo, Kristin
Hirbo, Jibril B.
Wang, Ying
Bhattacharya, Arjun
Zhao, Huiling
Namba, Shinichi
Surakka, Ida
Wolford, Brooke N.
Lo Faro, Valeria
Lopera-Maya, Esteban A.
Läll, Kristi
Favé, Marie-Julie
Partanen, Juulia J.
Chapman, Sinéad B.
Karjalainen, Juha
Kurki, Mitja
Maasha, Mutaamba
Brumpton, Ben M.
Chavan, Sameer
Chen, Tzu-Ting
Daya, Michelle
Ding, Yi
Feng, Yen-Chen A.
Guare, Lindsay A.
Gignoux, Christopher R.
Graham, Sarah E.
Hornsby, Whitney E.
Ingold, Nathan
Ismail, Said I.
Johnson, Ruth
Laisk, Triin
Lin, Kuang
Lv, Jun
Millwood, Iona Y.
Moreno-Grau, Sonia
Nam, Kisung
Palta, Priit
Pandit, Anita
Preuss, Michael H.
Saad, Chadi
Setia-Verma, Shefali
Thorsteinsdottir, Unnur
Uzunovic, Jasmina
Verma, Anurag
Zawistowski, Matthew
Zhong, Xue
Afifi, Nahla
Al-Dabhani, Kawthar M.
Al Thani, Asma
Bradford, Yuki
Campbell, Archie
Crooks, Kristy
de Bock, Geertruida H.
Damrauer, Scott M.
Douville, Nicholas J.
Finer, Sarah
Fritsche, Lars G.
Fthenou, Eleni
Gonzalez-Arroyo, Gilberto
Griffiths, Christopher J.
Guo, Yu
Hunt, Karen A.
Ioannidis, Alexander
Jansonius, Nomdo M.
Konuma, Takahiro
Lee, Ming Ta Michael
Lopez-Pineda, Arturo
Matsuda, Yuta
Marioni, Riccardo E.
Moatamed, Babak
Nava-Aguilar, Marco A.
Numakura, Kensuke
Patil, Snehal
Rafaels, Nicholas
Richmond, Anne
Rojas-Muñoz, Agustin
Shortt, Jonathan A.
Straub, Peter
Tao, Ran
Vanderwerff, Brett
Vernekar, Manvi
Veturi, Yogasudha
Barnes, Kathleen C.
Boezen, Marike
Chen, Zhengming
Chen, Chia-Yen
Cho, Judy
Smith, George Davey
Finucane, Hilary K.
Franke, Lude
Gamazon, Eric R.
Ganna, Andrea
Gaunt, Tom R.
Ge, Tian
Huang, Hailiang
Huffman, Jennifer
Katsanis, Nicholas
Koskela, Jukka T.
Lajonchere, Clara
Law, Matthew H.
Li, Liming
Lindgren, Cecilia M.
Loos, Ruth J.F.
MacGregor, Stuart
Matsuda, Koichi
Olsen, Catherine M.
Porteous, David J.
Shavit, Jordan A.
Snieder, Harold
Takano, Tomohiro
Trembath, Richard C.
Vonk, Judith M.
Whiteman, David C.
Wicks, Stephen J.
Wijmenga, Cisca
Wright, John
Zheng, Jie
Zhou, Xiang
Awadalla, Philip
Boehnke, Michael
Bustamante, Carlos D.
Cox, Nancy J.
Fatumo, Segun
Geschwind, Daniel H.
Hayward, Caroline
Hveem, Kristian
Kenny, Eimear E.
Lee, Seunggeun
Lin, Yen-Feng
Mbarek, Hamdi
Mägi, Reedik
Martin, Hilary C.
Medland, Sarah E.
Okada, Yukinori
Palotie, Aarno V.
Pasaniuc, Bogdan
Rader, Daniel J.
Ritchie, Marylyn D.
Sanna, Serena
Smoller, Jordan W.
Stefansson, Kari
van Heel, David A.
Walters, Robin G.
Zöllner, Sebastian
Martin, Alicia R.
Willer, Cristen J.
Daly, Mark J.
Neale, Benjamin M.
author_sort Zhou, Wei
collection PubMed
description Biobanks facilitate genome-wide association studies (GWASs), which have mapped genomic loci across a range of human diseases and traits. However, most biobanks are primarily composed of individuals of European ancestry. We introduce the Global Biobank Meta-analysis Initiative (GBMI)—a collaborative network of 23 biobanks from 4 continents representing more than 2.2 million consented individuals with genetic data linked to electronic health records. GBMI meta-analyzes summary statistics from GWASs generated using harmonized genotypes and phenotypes from member biobanks for 14 exemplar diseases and endpoints. This strategy validates that GWASs conducted in diverse biobanks can be integrated despite heterogeneity in case definitions, recruitment strategies, and baseline characteristics. This collaborative effort improves GWAS power for diseases, benefits understudied diseases, and improves risk prediction while also enabling the nomination of disease genes and drug candidates by incorporating gene and protein expression data and providing insight into the underlying biology of human diseases and traits.
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spelling pubmed-99037162023-02-10 Global Biobank Meta-analysis Initiative: Powering genetic discovery across human disease Zhou, Wei Kanai, Masahiro Wu, Kuan-Han H. Rasheed, Humaira Tsuo, Kristin Hirbo, Jibril B. Wang, Ying Bhattacharya, Arjun Zhao, Huiling Namba, Shinichi Surakka, Ida Wolford, Brooke N. Lo Faro, Valeria Lopera-Maya, Esteban A. Läll, Kristi Favé, Marie-Julie Partanen, Juulia J. Chapman, Sinéad B. Karjalainen, Juha Kurki, Mitja Maasha, Mutaamba Brumpton, Ben M. Chavan, Sameer Chen, Tzu-Ting Daya, Michelle Ding, Yi Feng, Yen-Chen A. Guare, Lindsay A. Gignoux, Christopher R. Graham, Sarah E. Hornsby, Whitney E. Ingold, Nathan Ismail, Said I. Johnson, Ruth Laisk, Triin Lin, Kuang Lv, Jun Millwood, Iona Y. Moreno-Grau, Sonia Nam, Kisung Palta, Priit Pandit, Anita Preuss, Michael H. Saad, Chadi Setia-Verma, Shefali Thorsteinsdottir, Unnur Uzunovic, Jasmina Verma, Anurag Zawistowski, Matthew Zhong, Xue Afifi, Nahla Al-Dabhani, Kawthar M. Al Thani, Asma Bradford, Yuki Campbell, Archie Crooks, Kristy de Bock, Geertruida H. Damrauer, Scott M. Douville, Nicholas J. Finer, Sarah Fritsche, Lars G. Fthenou, Eleni Gonzalez-Arroyo, Gilberto Griffiths, Christopher J. Guo, Yu Hunt, Karen A. Ioannidis, Alexander Jansonius, Nomdo M. Konuma, Takahiro Lee, Ming Ta Michael Lopez-Pineda, Arturo Matsuda, Yuta Marioni, Riccardo E. Moatamed, Babak Nava-Aguilar, Marco A. Numakura, Kensuke Patil, Snehal Rafaels, Nicholas Richmond, Anne Rojas-Muñoz, Agustin Shortt, Jonathan A. Straub, Peter Tao, Ran Vanderwerff, Brett Vernekar, Manvi Veturi, Yogasudha Barnes, Kathleen C. Boezen, Marike Chen, Zhengming Chen, Chia-Yen Cho, Judy Smith, George Davey Finucane, Hilary K. Franke, Lude Gamazon, Eric R. Ganna, Andrea Gaunt, Tom R. Ge, Tian Huang, Hailiang Huffman, Jennifer Katsanis, Nicholas Koskela, Jukka T. Lajonchere, Clara Law, Matthew H. Li, Liming Lindgren, Cecilia M. Loos, Ruth J.F. MacGregor, Stuart Matsuda, Koichi Olsen, Catherine M. Porteous, David J. Shavit, Jordan A. Snieder, Harold Takano, Tomohiro Trembath, Richard C. Vonk, Judith M. Whiteman, David C. Wicks, Stephen J. Wijmenga, Cisca Wright, John Zheng, Jie Zhou, Xiang Awadalla, Philip Boehnke, Michael Bustamante, Carlos D. Cox, Nancy J. Fatumo, Segun Geschwind, Daniel H. Hayward, Caroline Hveem, Kristian Kenny, Eimear E. Lee, Seunggeun Lin, Yen-Feng Mbarek, Hamdi Mägi, Reedik Martin, Hilary C. Medland, Sarah E. Okada, Yukinori Palotie, Aarno V. Pasaniuc, Bogdan Rader, Daniel J. Ritchie, Marylyn D. Sanna, Serena Smoller, Jordan W. Stefansson, Kari van Heel, David A. Walters, Robin G. Zöllner, Sebastian Martin, Alicia R. Willer, Cristen J. Daly, Mark J. Neale, Benjamin M. Cell Genom Article Biobanks facilitate genome-wide association studies (GWASs), which have mapped genomic loci across a range of human diseases and traits. However, most biobanks are primarily composed of individuals of European ancestry. We introduce the Global Biobank Meta-analysis Initiative (GBMI)—a collaborative network of 23 biobanks from 4 continents representing more than 2.2 million consented individuals with genetic data linked to electronic health records. GBMI meta-analyzes summary statistics from GWASs generated using harmonized genotypes and phenotypes from member biobanks for 14 exemplar diseases and endpoints. This strategy validates that GWASs conducted in diverse biobanks can be integrated despite heterogeneity in case definitions, recruitment strategies, and baseline characteristics. This collaborative effort improves GWAS power for diseases, benefits understudied diseases, and improves risk prediction while also enabling the nomination of disease genes and drug candidates by incorporating gene and protein expression data and providing insight into the underlying biology of human diseases and traits. Elsevier 2022-10-12 /pmc/articles/PMC9903716/ /pubmed/36777996 http://dx.doi.org/10.1016/j.xgen.2022.100192 Text en © 2022. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Zhou, Wei
Kanai, Masahiro
Wu, Kuan-Han H.
Rasheed, Humaira
Tsuo, Kristin
Hirbo, Jibril B.
Wang, Ying
Bhattacharya, Arjun
Zhao, Huiling
Namba, Shinichi
Surakka, Ida
Wolford, Brooke N.
Lo Faro, Valeria
Lopera-Maya, Esteban A.
Läll, Kristi
Favé, Marie-Julie
Partanen, Juulia J.
Chapman, Sinéad B.
Karjalainen, Juha
Kurki, Mitja
Maasha, Mutaamba
Brumpton, Ben M.
Chavan, Sameer
Chen, Tzu-Ting
Daya, Michelle
Ding, Yi
Feng, Yen-Chen A.
Guare, Lindsay A.
Gignoux, Christopher R.
Graham, Sarah E.
Hornsby, Whitney E.
Ingold, Nathan
Ismail, Said I.
Johnson, Ruth
Laisk, Triin
Lin, Kuang
Lv, Jun
Millwood, Iona Y.
Moreno-Grau, Sonia
Nam, Kisung
Palta, Priit
Pandit, Anita
Preuss, Michael H.
Saad, Chadi
Setia-Verma, Shefali
Thorsteinsdottir, Unnur
Uzunovic, Jasmina
Verma, Anurag
Zawistowski, Matthew
Zhong, Xue
Afifi, Nahla
Al-Dabhani, Kawthar M.
Al Thani, Asma
Bradford, Yuki
Campbell, Archie
Crooks, Kristy
de Bock, Geertruida H.
Damrauer, Scott M.
Douville, Nicholas J.
Finer, Sarah
Fritsche, Lars G.
Fthenou, Eleni
Gonzalez-Arroyo, Gilberto
Griffiths, Christopher J.
Guo, Yu
Hunt, Karen A.
Ioannidis, Alexander
Jansonius, Nomdo M.
Konuma, Takahiro
Lee, Ming Ta Michael
Lopez-Pineda, Arturo
Matsuda, Yuta
Marioni, Riccardo E.
Moatamed, Babak
Nava-Aguilar, Marco A.
Numakura, Kensuke
Patil, Snehal
Rafaels, Nicholas
Richmond, Anne
Rojas-Muñoz, Agustin
Shortt, Jonathan A.
Straub, Peter
Tao, Ran
Vanderwerff, Brett
Vernekar, Manvi
Veturi, Yogasudha
Barnes, Kathleen C.
Boezen, Marike
Chen, Zhengming
Chen, Chia-Yen
Cho, Judy
Smith, George Davey
Finucane, Hilary K.
Franke, Lude
Gamazon, Eric R.
Ganna, Andrea
Gaunt, Tom R.
Ge, Tian
Huang, Hailiang
Huffman, Jennifer
Katsanis, Nicholas
Koskela, Jukka T.
Lajonchere, Clara
Law, Matthew H.
Li, Liming
Lindgren, Cecilia M.
Loos, Ruth J.F.
MacGregor, Stuart
Matsuda, Koichi
Olsen, Catherine M.
Porteous, David J.
Shavit, Jordan A.
Snieder, Harold
Takano, Tomohiro
Trembath, Richard C.
Vonk, Judith M.
Whiteman, David C.
Wicks, Stephen J.
Wijmenga, Cisca
Wright, John
Zheng, Jie
Zhou, Xiang
Awadalla, Philip
Boehnke, Michael
Bustamante, Carlos D.
Cox, Nancy J.
Fatumo, Segun
Geschwind, Daniel H.
Hayward, Caroline
Hveem, Kristian
Kenny, Eimear E.
Lee, Seunggeun
Lin, Yen-Feng
Mbarek, Hamdi
Mägi, Reedik
Martin, Hilary C.
Medland, Sarah E.
Okada, Yukinori
Palotie, Aarno V.
Pasaniuc, Bogdan
Rader, Daniel J.
Ritchie, Marylyn D.
Sanna, Serena
Smoller, Jordan W.
Stefansson, Kari
van Heel, David A.
Walters, Robin G.
Zöllner, Sebastian
Martin, Alicia R.
Willer, Cristen J.
Daly, Mark J.
Neale, Benjamin M.
Global Biobank Meta-analysis Initiative: Powering genetic discovery across human disease
title Global Biobank Meta-analysis Initiative: Powering genetic discovery across human disease
title_full Global Biobank Meta-analysis Initiative: Powering genetic discovery across human disease
title_fullStr Global Biobank Meta-analysis Initiative: Powering genetic discovery across human disease
title_full_unstemmed Global Biobank Meta-analysis Initiative: Powering genetic discovery across human disease
title_short Global Biobank Meta-analysis Initiative: Powering genetic discovery across human disease
title_sort global biobank meta-analysis initiative: powering genetic discovery across human disease
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9903716/
https://www.ncbi.nlm.nih.gov/pubmed/36777996
http://dx.doi.org/10.1016/j.xgen.2022.100192
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