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The voice of COVID-19: Breath and cough recording classification with temporal decision trees and random forests

Symbolic learning is the logic-based approach to machine learning, and its mission is to provide algorithms and methodologies to extract logical information from data and express it in an interpretable way. Interval temporal logic has been recently proposed as a suitable tool for symbolic learning,...

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Autores principales: Manzella, F., Pagliarini, G., Sciavicco, G., Stan, I.E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9904537/
https://www.ncbi.nlm.nih.gov/pubmed/36868683
http://dx.doi.org/10.1016/j.artmed.2022.102486
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author Manzella, F.
Pagliarini, G.
Sciavicco, G.
Stan, I.E.
author_facet Manzella, F.
Pagliarini, G.
Sciavicco, G.
Stan, I.E.
author_sort Manzella, F.
collection PubMed
description Symbolic learning is the logic-based approach to machine learning, and its mission is to provide algorithms and methodologies to extract logical information from data and express it in an interpretable way. Interval temporal logic has been recently proposed as a suitable tool for symbolic learning, specifically via the design of an interval temporal logic decision tree extraction algorithm. In order to improve their performances, interval temporal decision trees can be embedded into interval temporal random forests, mimicking the corresponding schema at the propositional level. In this article we consider a dataset of cough and breath sample recordings of volunteer subjects, labeled with their COVID-19 status, originally collected by the University of Cambridge. By interpreting such recordings as multivariate time series, we study the problem of their automated classification using interval temporal decision trees and forests. While this problem has been approached with the same dataset as well as with other datasets, in all cases, non-symbolic learning methods (usually, deep learning-based) have been applied to solve it; in this article we apply a symbolic approach, and show that it does not only outperform the state-of-the-art obtained with the same dataset, but its results are also superior to those of most non-symbolic techniques applied on other datasets. As an added bonus, thanks to the symbolic nature of our approach, we are also able to extract explicit knowledge to help physicians characterize typical COVID-positive cough and breath.
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spelling pubmed-99045372023-02-08 The voice of COVID-19: Breath and cough recording classification with temporal decision trees and random forests Manzella, F. Pagliarini, G. Sciavicco, G. Stan, I.E. Artif Intell Med Research Paper Symbolic learning is the logic-based approach to machine learning, and its mission is to provide algorithms and methodologies to extract logical information from data and express it in an interpretable way. Interval temporal logic has been recently proposed as a suitable tool for symbolic learning, specifically via the design of an interval temporal logic decision tree extraction algorithm. In order to improve their performances, interval temporal decision trees can be embedded into interval temporal random forests, mimicking the corresponding schema at the propositional level. In this article we consider a dataset of cough and breath sample recordings of volunteer subjects, labeled with their COVID-19 status, originally collected by the University of Cambridge. By interpreting such recordings as multivariate time series, we study the problem of their automated classification using interval temporal decision trees and forests. While this problem has been approached with the same dataset as well as with other datasets, in all cases, non-symbolic learning methods (usually, deep learning-based) have been applied to solve it; in this article we apply a symbolic approach, and show that it does not only outperform the state-of-the-art obtained with the same dataset, but its results are also superior to those of most non-symbolic techniques applied on other datasets. As an added bonus, thanks to the symbolic nature of our approach, we are also able to extract explicit knowledge to help physicians characterize typical COVID-positive cough and breath. Elsevier B.V. 2023-03 2023-02-04 /pmc/articles/PMC9904537/ /pubmed/36868683 http://dx.doi.org/10.1016/j.artmed.2022.102486 Text en © 2023 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Research Paper
Manzella, F.
Pagliarini, G.
Sciavicco, G.
Stan, I.E.
The voice of COVID-19: Breath and cough recording classification with temporal decision trees and random forests
title The voice of COVID-19: Breath and cough recording classification with temporal decision trees and random forests
title_full The voice of COVID-19: Breath and cough recording classification with temporal decision trees and random forests
title_fullStr The voice of COVID-19: Breath and cough recording classification with temporal decision trees and random forests
title_full_unstemmed The voice of COVID-19: Breath and cough recording classification with temporal decision trees and random forests
title_short The voice of COVID-19: Breath and cough recording classification with temporal decision trees and random forests
title_sort voice of covid-19: breath and cough recording classification with temporal decision trees and random forests
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9904537/
https://www.ncbi.nlm.nih.gov/pubmed/36868683
http://dx.doi.org/10.1016/j.artmed.2022.102486
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