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Genomic features and its potential implication in bone oligometastatic NSCLC

OBJECTIVES: Emerging evidence have demonstrated that oligometastatic non-small cell lung cancer (NSCLC) can achieve clinical benefit from local consolidative therapy. Bone oligometastasis is common in advanced lung cancer, but little is known about its molecular features. The purpose of our study ai...

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Autores principales: Liao, Rongxin, Yi, Guangming, Shen, Lu, Zhang, Xiaoyue, Xu, Zaicheng, Peng, Yuan, Yang, Zhenzhou
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9906959/
https://www.ncbi.nlm.nih.gov/pubmed/36755257
http://dx.doi.org/10.1186/s12890-023-02354-2
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author Liao, Rongxin
Yi, Guangming
Shen, Lu
Zhang, Xiaoyue
Xu, Zaicheng
Peng, Yuan
Yang, Zhenzhou
author_facet Liao, Rongxin
Yi, Guangming
Shen, Lu
Zhang, Xiaoyue
Xu, Zaicheng
Peng, Yuan
Yang, Zhenzhou
author_sort Liao, Rongxin
collection PubMed
description OBJECTIVES: Emerging evidence have demonstrated that oligometastatic non-small cell lung cancer (NSCLC) can achieve clinical benefit from local consolidative therapy. Bone oligometastasis is common in advanced lung cancer, but little is known about its molecular features. The purpose of our study aimed to investigate the genomic landscape bone oligometastatic NSCLC. METHODS: We collected paired blood and tissue samples from 31 bone oligometastatic NSCLC patients to make a comprehensive analysis of mutations by performing next-generation sequencing. RESULTS: A total of 186 genomic mutations were detected from 105 distinct cancer-relevant genes, with a median number of 6 alterations per tumor. The most frequently mutated genes were EGFR (58%) and TP53 (55%), followed by KRAS (16%), CDKN2A (13%) and MET (13%). The signatures related to smoking, aging, homologous recombination deficiency and APOBEC were identified as the most important mutational processes in bone oligometastasis. The median tumor mutation burden was 4.4 mutations/Mb. Altogether, genetic alterations of bone oligometastasis are highly targetable that 74.19% of patients had at least one actionable alteration that was recommended for targeted therapy based on the OncoKB evidence. Of these patients, 16.13% had two actionable alterations that could potentially benefit from a different combination of targeted drugs to achieve better outcomes. CONCLUSION: Our research comprehensively elucidates the genomic features of bone oligometastatic NSCLC patients, which may optimize individualized cancer treatment in the era of precision medicine. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12890-023-02354-2.
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spelling pubmed-99069592023-02-08 Genomic features and its potential implication in bone oligometastatic NSCLC Liao, Rongxin Yi, Guangming Shen, Lu Zhang, Xiaoyue Xu, Zaicheng Peng, Yuan Yang, Zhenzhou BMC Pulm Med Research OBJECTIVES: Emerging evidence have demonstrated that oligometastatic non-small cell lung cancer (NSCLC) can achieve clinical benefit from local consolidative therapy. Bone oligometastasis is common in advanced lung cancer, but little is known about its molecular features. The purpose of our study aimed to investigate the genomic landscape bone oligometastatic NSCLC. METHODS: We collected paired blood and tissue samples from 31 bone oligometastatic NSCLC patients to make a comprehensive analysis of mutations by performing next-generation sequencing. RESULTS: A total of 186 genomic mutations were detected from 105 distinct cancer-relevant genes, with a median number of 6 alterations per tumor. The most frequently mutated genes were EGFR (58%) and TP53 (55%), followed by KRAS (16%), CDKN2A (13%) and MET (13%). The signatures related to smoking, aging, homologous recombination deficiency and APOBEC were identified as the most important mutational processes in bone oligometastasis. The median tumor mutation burden was 4.4 mutations/Mb. Altogether, genetic alterations of bone oligometastasis are highly targetable that 74.19% of patients had at least one actionable alteration that was recommended for targeted therapy based on the OncoKB evidence. Of these patients, 16.13% had two actionable alterations that could potentially benefit from a different combination of targeted drugs to achieve better outcomes. CONCLUSION: Our research comprehensively elucidates the genomic features of bone oligometastatic NSCLC patients, which may optimize individualized cancer treatment in the era of precision medicine. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12890-023-02354-2. BioMed Central 2023-02-08 /pmc/articles/PMC9906959/ /pubmed/36755257 http://dx.doi.org/10.1186/s12890-023-02354-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Liao, Rongxin
Yi, Guangming
Shen, Lu
Zhang, Xiaoyue
Xu, Zaicheng
Peng, Yuan
Yang, Zhenzhou
Genomic features and its potential implication in bone oligometastatic NSCLC
title Genomic features and its potential implication in bone oligometastatic NSCLC
title_full Genomic features and its potential implication in bone oligometastatic NSCLC
title_fullStr Genomic features and its potential implication in bone oligometastatic NSCLC
title_full_unstemmed Genomic features and its potential implication in bone oligometastatic NSCLC
title_short Genomic features and its potential implication in bone oligometastatic NSCLC
title_sort genomic features and its potential implication in bone oligometastatic nsclc
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9906959/
https://www.ncbi.nlm.nih.gov/pubmed/36755257
http://dx.doi.org/10.1186/s12890-023-02354-2
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