How to optimally sample a sequence for rapid analysis

MOTIVATION: We face an increasing flood of genetic sequence data, from diverse sources, requiring rapid computational analysis. Rapid analysis can be achieved by sampling a subset of positions in each sequence. Previous sequence-sampling methods, such as minimizers, syncmers and minimally overlappin...

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Detalles Bibliográficos
Autores principales: Frith, Martin C, Shaw, Jim, Spouge, John L
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Original Paper
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9907223/
https://www.ncbi.nlm.nih.gov/pubmed/36702468
http://dx.doi.org/10.1093/bioinformatics/btad057

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9907223/
https://www.ncbi.nlm.nih.gov/pubmed/36702468
http://dx.doi.org/10.1093/bioinformatics/btad057

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