Cargando…

MarkIt: A Collaborative Artificial Intelligence Annotation Platform Leveraging Blockchain For Medical Imaging Research

Current research on medical image processing relies heavily on the amount and quality of input data. Specifically, supervised machine learning methods require well-annotated datasets. A lack of annotation tools limits the potential to achieve high-volume processing and scaled systems with a proper r...

Descripción completa

Detalles Bibliográficos
Autores principales: Witowski, Jan, Choi, Jongmun, Jeon, Soomin, Kim, Doyun, Chung, Joowon, Conklin, John, Longo, Maria Gabriela Figueiro, Succi, Marc D., Do, Synho
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Partners in Digital Health 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9907418/
https://www.ncbi.nlm.nih.gov/pubmed/36777485
http://dx.doi.org/10.30953/bhty.v4.176
_version_ 1784884171758370816
author Witowski, Jan
Choi, Jongmun
Jeon, Soomin
Kim, Doyun
Chung, Joowon
Conklin, John
Longo, Maria Gabriela Figueiro
Succi, Marc D.
Do, Synho
author_facet Witowski, Jan
Choi, Jongmun
Jeon, Soomin
Kim, Doyun
Chung, Joowon
Conklin, John
Longo, Maria Gabriela Figueiro
Succi, Marc D.
Do, Synho
author_sort Witowski, Jan
collection PubMed
description Current research on medical image processing relies heavily on the amount and quality of input data. Specifically, supervised machine learning methods require well-annotated datasets. A lack of annotation tools limits the potential to achieve high-volume processing and scaled systems with a proper reward mechanism. We developed MarkIt, a web-based tool, for collaborative annotation of medical imaging data with artificial intelligence and blockchain technologies. Our platform handles both Digital Imaging and Communications in Medicine (DICOM) and non-DICOM images, and allows users to annotate them for classification and object detection tasks in an efficient manner. MarkIt can accelerate the annotation process and keep track of user activities to calculate a fair reward. A proof-of-concept experiment was conducted with three fellowship-trained radiologists, each of whom annotated 1,000 chest X-ray studies for multi-label classification. We calculated the inter-rater agreement and estimated the value of the dataset to distribute the reward for annotators using a crypto currency. We hypothesize that MarkIt allows the typically arduous annotation task to become more efficient. In addition, MarkIt can serve as a platform to evaluate the value of data and trade the annotation results in a more scalable manner in the future. The platform is publicly available for testing on https://markit.mgh.harvard.edu.
format Online
Article
Text
id pubmed-9907418
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Partners in Digital Health
record_format MEDLINE/PubMed
spelling pubmed-99074182023-02-10 MarkIt: A Collaborative Artificial Intelligence Annotation Platform Leveraging Blockchain For Medical Imaging Research Witowski, Jan Choi, Jongmun Jeon, Soomin Kim, Doyun Chung, Joowon Conklin, John Longo, Maria Gabriela Figueiro Succi, Marc D. Do, Synho Blockchain Healthc Today Proof of Concept Current research on medical image processing relies heavily on the amount and quality of input data. Specifically, supervised machine learning methods require well-annotated datasets. A lack of annotation tools limits the potential to achieve high-volume processing and scaled systems with a proper reward mechanism. We developed MarkIt, a web-based tool, for collaborative annotation of medical imaging data with artificial intelligence and blockchain technologies. Our platform handles both Digital Imaging and Communications in Medicine (DICOM) and non-DICOM images, and allows users to annotate them for classification and object detection tasks in an efficient manner. MarkIt can accelerate the annotation process and keep track of user activities to calculate a fair reward. A proof-of-concept experiment was conducted with three fellowship-trained radiologists, each of whom annotated 1,000 chest X-ray studies for multi-label classification. We calculated the inter-rater agreement and estimated the value of the dataset to distribute the reward for annotators using a crypto currency. We hypothesize that MarkIt allows the typically arduous annotation task to become more efficient. In addition, MarkIt can serve as a platform to evaluate the value of data and trade the annotation results in a more scalable manner in the future. The platform is publicly available for testing on https://markit.mgh.harvard.edu. Partners in Digital Health 2021-06-22 /pmc/articles/PMC9907418/ /pubmed/36777485 http://dx.doi.org/10.30953/bhty.v4.176 Text en © 2021 The Authors. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution 4.0 International License, allowing third parties to copy and redistribute the material in any medium or format and to remix, transform, and build upon the material for any purpose, even commercially, provided the original work is properly cited and states its license.
spellingShingle Proof of Concept
Witowski, Jan
Choi, Jongmun
Jeon, Soomin
Kim, Doyun
Chung, Joowon
Conklin, John
Longo, Maria Gabriela Figueiro
Succi, Marc D.
Do, Synho
MarkIt: A Collaborative Artificial Intelligence Annotation Platform Leveraging Blockchain For Medical Imaging Research
title MarkIt: A Collaborative Artificial Intelligence Annotation Platform Leveraging Blockchain For Medical Imaging Research
title_full MarkIt: A Collaborative Artificial Intelligence Annotation Platform Leveraging Blockchain For Medical Imaging Research
title_fullStr MarkIt: A Collaborative Artificial Intelligence Annotation Platform Leveraging Blockchain For Medical Imaging Research
title_full_unstemmed MarkIt: A Collaborative Artificial Intelligence Annotation Platform Leveraging Blockchain For Medical Imaging Research
title_short MarkIt: A Collaborative Artificial Intelligence Annotation Platform Leveraging Blockchain For Medical Imaging Research
title_sort markit: a collaborative artificial intelligence annotation platform leveraging blockchain for medical imaging research
topic Proof of Concept
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9907418/
https://www.ncbi.nlm.nih.gov/pubmed/36777485
http://dx.doi.org/10.30953/bhty.v4.176
work_keys_str_mv AT witowskijan markitacollaborativeartificialintelligenceannotationplatformleveragingblockchainformedicalimagingresearch
AT choijongmun markitacollaborativeartificialintelligenceannotationplatformleveragingblockchainformedicalimagingresearch
AT jeonsoomin markitacollaborativeartificialintelligenceannotationplatformleveragingblockchainformedicalimagingresearch
AT kimdoyun markitacollaborativeartificialintelligenceannotationplatformleveragingblockchainformedicalimagingresearch
AT chungjoowon markitacollaborativeartificialintelligenceannotationplatformleveragingblockchainformedicalimagingresearch
AT conklinjohn markitacollaborativeartificialintelligenceannotationplatformleveragingblockchainformedicalimagingresearch
AT longomariagabrielafigueiro markitacollaborativeartificialintelligenceannotationplatformleveragingblockchainformedicalimagingresearch
AT succimarcd markitacollaborativeartificialintelligenceannotationplatformleveragingblockchainformedicalimagingresearch
AT dosynho markitacollaborativeartificialintelligenceannotationplatformleveragingblockchainformedicalimagingresearch