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Agro-morphological and genetic variability analysis in oat germplasms with special emphasis on food and feed
The gaining attention of underutilized oat crops for both food and feed, mining of quality and yield related genes/QTLs from available germplasms of oat is need of the hour. The large family of grasses has a vast number of germplasms that could be harnessed for bio-prospecting. The selection of cros...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9907803/ https://www.ncbi.nlm.nih.gov/pubmed/36753474 http://dx.doi.org/10.1371/journal.pone.0280450 |
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author | Kumar, Raj Varghese, Smriti Jayaswal, Deepanshu Jayaswall, Kuldip Yadav, Kuldeep Mishra, Gaurav Vyas, R. P. Singh, H. C. Prakash, H. G. Singh, Arvind Nath Kumar, Sanjay |
author_facet | Kumar, Raj Varghese, Smriti Jayaswal, Deepanshu Jayaswall, Kuldip Yadav, Kuldeep Mishra, Gaurav Vyas, R. P. Singh, H. C. Prakash, H. G. Singh, Arvind Nath Kumar, Sanjay |
author_sort | Kumar, Raj |
collection | PubMed |
description | The gaining attention of underutilized oat crops for both food and feed, mining of quality and yield related genes/QTLs from available germplasms of oat is need of the hour. The large family of grasses has a vast number of germplasms that could be harnessed for bio-prospecting. The selection of cross-compatible oat germplasms by molecular markers could be used for the introgression of the novel traits into the elite background of oats. The process needs a thorough study of genetic diversity to see the evolutionary relatedness among germplasms. Considering this, in the present study, the genetic diversity of 38 oat germplasms with 12 agro-morphological traits was carried out using 22 Inter Simple Sequence Repeat (ISSR) markers. We found a high level of polymorphism and 158 distinctive alleles; on average 7.18 alleles per primer, further, high-yielding genotypes were identified with the help of phenotypic data and genetic diversity was analyzed by using DNA fingerprint-based principal component analysis, UPGMA dendrogram. Among these 38 germplasms; eight were identified as superior under high grain yield (OS-424, OS-403, NDO-1101, OL-10, UPO-212, OS-405, OS-6, and OS-346) and another eight germplasms were identified as superior for the high fresh weight (for fodder purpose, NDO-711, RO-19, OL-14, OL-1760/OL-11, NDO-10, UPO-212, UPO-06-1, and RO-11-1). These results suggest that germplasms that are closely related (Cross-compatible) and have good potential for desirable traits could be used for varietal development by using marker-assisted selection. |
format | Online Article Text |
id | pubmed-9907803 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-99078032023-02-08 Agro-morphological and genetic variability analysis in oat germplasms with special emphasis on food and feed Kumar, Raj Varghese, Smriti Jayaswal, Deepanshu Jayaswall, Kuldip Yadav, Kuldeep Mishra, Gaurav Vyas, R. P. Singh, H. C. Prakash, H. G. Singh, Arvind Nath Kumar, Sanjay PLoS One Research Article The gaining attention of underutilized oat crops for both food and feed, mining of quality and yield related genes/QTLs from available germplasms of oat is need of the hour. The large family of grasses has a vast number of germplasms that could be harnessed for bio-prospecting. The selection of cross-compatible oat germplasms by molecular markers could be used for the introgression of the novel traits into the elite background of oats. The process needs a thorough study of genetic diversity to see the evolutionary relatedness among germplasms. Considering this, in the present study, the genetic diversity of 38 oat germplasms with 12 agro-morphological traits was carried out using 22 Inter Simple Sequence Repeat (ISSR) markers. We found a high level of polymorphism and 158 distinctive alleles; on average 7.18 alleles per primer, further, high-yielding genotypes were identified with the help of phenotypic data and genetic diversity was analyzed by using DNA fingerprint-based principal component analysis, UPGMA dendrogram. Among these 38 germplasms; eight were identified as superior under high grain yield (OS-424, OS-403, NDO-1101, OL-10, UPO-212, OS-405, OS-6, and OS-346) and another eight germplasms were identified as superior for the high fresh weight (for fodder purpose, NDO-711, RO-19, OL-14, OL-1760/OL-11, NDO-10, UPO-212, UPO-06-1, and RO-11-1). These results suggest that germplasms that are closely related (Cross-compatible) and have good potential for desirable traits could be used for varietal development by using marker-assisted selection. Public Library of Science 2023-02-08 /pmc/articles/PMC9907803/ /pubmed/36753474 http://dx.doi.org/10.1371/journal.pone.0280450 Text en © 2023 Kumar et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Kumar, Raj Varghese, Smriti Jayaswal, Deepanshu Jayaswall, Kuldip Yadav, Kuldeep Mishra, Gaurav Vyas, R. P. Singh, H. C. Prakash, H. G. Singh, Arvind Nath Kumar, Sanjay Agro-morphological and genetic variability analysis in oat germplasms with special emphasis on food and feed |
title | Agro-morphological and genetic variability analysis in oat germplasms with special emphasis on food and feed |
title_full | Agro-morphological and genetic variability analysis in oat germplasms with special emphasis on food and feed |
title_fullStr | Agro-morphological and genetic variability analysis in oat germplasms with special emphasis on food and feed |
title_full_unstemmed | Agro-morphological and genetic variability analysis in oat germplasms with special emphasis on food and feed |
title_short | Agro-morphological and genetic variability analysis in oat germplasms with special emphasis on food and feed |
title_sort | agro-morphological and genetic variability analysis in oat germplasms with special emphasis on food and feed |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9907803/ https://www.ncbi.nlm.nih.gov/pubmed/36753474 http://dx.doi.org/10.1371/journal.pone.0280450 |
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