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Comprehensive analysis of NT5DC family prognostic and immune significance in breast cancer

Among the most common malignancies, breast cancer has a high incidence and mortality rate. NT5DC family is a highly well-conserved 5′-nucleotidase. Previous studies showed that the progression of tumors was associated with some NT5DC family members. However, there are no studies about the comprehens...

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Autores principales: Jia, Yiwei, Li, Jia, Wu, Huizi, Wang, Weiwei, Sun, Shiyu, Feng, Cong, Liu, Xuan, Li, Chaofan, Zhang, Yu, Cai, Yifan, Wei, Xinyu, Yao, Peizhuo, Liu, Xuanyu, Zhang, Shuqun, Wu, Fei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9907984/
https://www.ncbi.nlm.nih.gov/pubmed/36820551
http://dx.doi.org/10.1097/MD.0000000000032927
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author Jia, Yiwei
Li, Jia
Wu, Huizi
Wang, Weiwei
Sun, Shiyu
Feng, Cong
Liu, Xuan
Li, Chaofan
Zhang, Yu
Cai, Yifan
Wei, Xinyu
Yao, Peizhuo
Liu, Xuanyu
Zhang, Shuqun
Wu, Fei
author_facet Jia, Yiwei
Li, Jia
Wu, Huizi
Wang, Weiwei
Sun, Shiyu
Feng, Cong
Liu, Xuan
Li, Chaofan
Zhang, Yu
Cai, Yifan
Wei, Xinyu
Yao, Peizhuo
Liu, Xuanyu
Zhang, Shuqun
Wu, Fei
author_sort Jia, Yiwei
collection PubMed
description Among the most common malignancies, breast cancer has a high incidence and mortality rate. NT5DC family is a highly well-conserved 5′-nucleotidase. Previous studies showed that the progression of tumors was associated with some NT5DC family members. However, there are no studies about the comprehensive analysis such as expression, prognosis, and immune properties of NT5DC family in breast cancer. Based on the data from The Cancer Genome Atlas database, we used UALCAN, Tumor Immune Estimation Resource, Breast cancer gene-expression miner (Bc-GenExMiner), Kaplan–Meier Plotter, TISIDB, cBioPortal, GeneMANIA, Search Tool for the Retrieval of Interacting Genes, Metascape, Tumor Immune Single-cell Hub, The Database for Annotation, Visualization and Integrated Discovery, and Gene Set Cancer Analysis databases to explore expression, prognostic and diagnostic value, genetic alterations, biological function, immune value and drug sensitivity of NT5DC family in breast cancer patients. There was a downregulation of NT5C2, NT5DC1, and NT5DC3 in breast cancer compared to normal tissues, and NT5DC2 instead. All NT5DC family members were associated with the clinicopathological parameters of breast cancer patients. Survival and ROC analysis revealed that NT5DC family genes were related to the prognosis and diagnosis of breast cancer. NT5DC family were mainly involved in nucleotide metabolism. Moreover, NT5DC family were significantly associated with tumor immune microenvironment, diverse immune cells, and immune checkpoints in breast cancer. This research showed that NT5DC family might be novel prognostic biomarkers and immunotherapeutic targets of breast cancer.
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spelling pubmed-99079842023-02-10 Comprehensive analysis of NT5DC family prognostic and immune significance in breast cancer Jia, Yiwei Li, Jia Wu, Huizi Wang, Weiwei Sun, Shiyu Feng, Cong Liu, Xuan Li, Chaofan Zhang, Yu Cai, Yifan Wei, Xinyu Yao, Peizhuo Liu, Xuanyu Zhang, Shuqun Wu, Fei Medicine (Baltimore) 5750 Among the most common malignancies, breast cancer has a high incidence and mortality rate. NT5DC family is a highly well-conserved 5′-nucleotidase. Previous studies showed that the progression of tumors was associated with some NT5DC family members. However, there are no studies about the comprehensive analysis such as expression, prognosis, and immune properties of NT5DC family in breast cancer. Based on the data from The Cancer Genome Atlas database, we used UALCAN, Tumor Immune Estimation Resource, Breast cancer gene-expression miner (Bc-GenExMiner), Kaplan–Meier Plotter, TISIDB, cBioPortal, GeneMANIA, Search Tool for the Retrieval of Interacting Genes, Metascape, Tumor Immune Single-cell Hub, The Database for Annotation, Visualization and Integrated Discovery, and Gene Set Cancer Analysis databases to explore expression, prognostic and diagnostic value, genetic alterations, biological function, immune value and drug sensitivity of NT5DC family in breast cancer patients. There was a downregulation of NT5C2, NT5DC1, and NT5DC3 in breast cancer compared to normal tissues, and NT5DC2 instead. All NT5DC family members were associated with the clinicopathological parameters of breast cancer patients. Survival and ROC analysis revealed that NT5DC family genes were related to the prognosis and diagnosis of breast cancer. NT5DC family were mainly involved in nucleotide metabolism. Moreover, NT5DC family were significantly associated with tumor immune microenvironment, diverse immune cells, and immune checkpoints in breast cancer. This research showed that NT5DC family might be novel prognostic biomarkers and immunotherapeutic targets of breast cancer. Lippincott Williams & Wilkins 2023-02-10 /pmc/articles/PMC9907984/ /pubmed/36820551 http://dx.doi.org/10.1097/MD.0000000000032927 Text en Copyright © 2023 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License 4.0 (CCBY) (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle 5750
Jia, Yiwei
Li, Jia
Wu, Huizi
Wang, Weiwei
Sun, Shiyu
Feng, Cong
Liu, Xuan
Li, Chaofan
Zhang, Yu
Cai, Yifan
Wei, Xinyu
Yao, Peizhuo
Liu, Xuanyu
Zhang, Shuqun
Wu, Fei
Comprehensive analysis of NT5DC family prognostic and immune significance in breast cancer
title Comprehensive analysis of NT5DC family prognostic and immune significance in breast cancer
title_full Comprehensive analysis of NT5DC family prognostic and immune significance in breast cancer
title_fullStr Comprehensive analysis of NT5DC family prognostic and immune significance in breast cancer
title_full_unstemmed Comprehensive analysis of NT5DC family prognostic and immune significance in breast cancer
title_short Comprehensive analysis of NT5DC family prognostic and immune significance in breast cancer
title_sort comprehensive analysis of nt5dc family prognostic and immune significance in breast cancer
topic 5750
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9907984/
https://www.ncbi.nlm.nih.gov/pubmed/36820551
http://dx.doi.org/10.1097/MD.0000000000032927
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