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Accountable survival contrast-learning for optimal dynamic treatment regimes
Dynamic treatment regime (DTR) is an emerging paradigm in recent medical studies, which searches a series of decision rules to assign optimal treatments to each patient by taking into account individual features such as genetic, environmental, and social factors. Although there is a large and growin...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9908913/ https://www.ncbi.nlm.nih.gov/pubmed/36755137 http://dx.doi.org/10.1038/s41598-023-29106-w |
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author | Choi, Taehwa Lee, Hyunjun Choi, Sangbum |
author_facet | Choi, Taehwa Lee, Hyunjun Choi, Sangbum |
author_sort | Choi, Taehwa |
collection | PubMed |
description | Dynamic treatment regime (DTR) is an emerging paradigm in recent medical studies, which searches a series of decision rules to assign optimal treatments to each patient by taking into account individual features such as genetic, environmental, and social factors. Although there is a large and growing literature on statistical methods to estimate optimal treatment regimes, most methodologies focused on complete data. In this article, we propose an accountable contrast-learning algorithm for optimal dynamic treatment regime with survival endpoints. Our estimating procedure is originated from a doubly-robust weighted classification scheme, which is a model-based contrast-learning method that directly characterizes the interaction terms between predictors and treatments without main effects. To reflect the censorship, we adopt the pseudo-value approach that replaces survival quantities with pseudo-observations for the time-to-event outcome. Unlike many existing approaches, mostly based on complicated outcome regression modeling or inverse-probability weighting schemes, the pseudo-value approach greatly simplifies the estimating procedure for optimal treatment regime by allowing investigators to conveniently apply standard machine learning techniques to censored survival data without losing much efficiency. We further explore a SCAD-penalization to find informative clinical variables and modified algorithms to handle multiple treatment options by searching upper and lower bounds of the objective function. We demonstrate the utility of our proposal via extensive simulations and application to AIDS data. |
format | Online Article Text |
id | pubmed-9908913 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-99089132023-02-10 Accountable survival contrast-learning for optimal dynamic treatment regimes Choi, Taehwa Lee, Hyunjun Choi, Sangbum Sci Rep Article Dynamic treatment regime (DTR) is an emerging paradigm in recent medical studies, which searches a series of decision rules to assign optimal treatments to each patient by taking into account individual features such as genetic, environmental, and social factors. Although there is a large and growing literature on statistical methods to estimate optimal treatment regimes, most methodologies focused on complete data. In this article, we propose an accountable contrast-learning algorithm for optimal dynamic treatment regime with survival endpoints. Our estimating procedure is originated from a doubly-robust weighted classification scheme, which is a model-based contrast-learning method that directly characterizes the interaction terms between predictors and treatments without main effects. To reflect the censorship, we adopt the pseudo-value approach that replaces survival quantities with pseudo-observations for the time-to-event outcome. Unlike many existing approaches, mostly based on complicated outcome regression modeling or inverse-probability weighting schemes, the pseudo-value approach greatly simplifies the estimating procedure for optimal treatment regime by allowing investigators to conveniently apply standard machine learning techniques to censored survival data without losing much efficiency. We further explore a SCAD-penalization to find informative clinical variables and modified algorithms to handle multiple treatment options by searching upper and lower bounds of the objective function. We demonstrate the utility of our proposal via extensive simulations and application to AIDS data. Nature Publishing Group UK 2023-02-08 /pmc/articles/PMC9908913/ /pubmed/36755137 http://dx.doi.org/10.1038/s41598-023-29106-w Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Choi, Taehwa Lee, Hyunjun Choi, Sangbum Accountable survival contrast-learning for optimal dynamic treatment regimes |
title | Accountable survival contrast-learning for optimal dynamic treatment regimes |
title_full | Accountable survival contrast-learning for optimal dynamic treatment regimes |
title_fullStr | Accountable survival contrast-learning for optimal dynamic treatment regimes |
title_full_unstemmed | Accountable survival contrast-learning for optimal dynamic treatment regimes |
title_short | Accountable survival contrast-learning for optimal dynamic treatment regimes |
title_sort | accountable survival contrast-learning for optimal dynamic treatment regimes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9908913/ https://www.ncbi.nlm.nih.gov/pubmed/36755137 http://dx.doi.org/10.1038/s41598-023-29106-w |
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