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Porcine circovirus 3 (PCV-3) variability: Is it in the virus or in the classification criteria?
The continuous discovery of new viruses during the last decades has increased the need for new classification approaches and rules. Currently, the International Committee on Taxonomy of Viruses classifies viruses up to the species level. However, because of the higher variability of most of these in...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9909946/ https://www.ncbi.nlm.nih.gov/pubmed/36759848 http://dx.doi.org/10.1186/s12985-023-01984-6 |
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author | Franzo, Giovanni Segalés, Joaquim |
author_facet | Franzo, Giovanni Segalés, Joaquim |
author_sort | Franzo, Giovanni |
collection | PubMed |
description | The continuous discovery of new viruses during the last decades has increased the need for new classification approaches and rules. Currently, the International Committee on Taxonomy of Viruses classifies viruses up to the species level. However, because of the higher variability of most of these infectious agents, a below-species categorization is often required for proper epidemiological investigations. Unfortunately, variable criteria are typically proposed by different research groups, leading to misleading and poorly reproducible results. This scenario occurred for the recently identified Porcine circovirus 3. Although genotype definition standards had been defined by a group of experts in the field, recent articles have been published introducing new genotypes, whose classification rules are not reported. We therefore would like to stress the usefulness of defining and maintaining a common language to allow proper results comparison among groups. We consider the consensus opinion of a heterogeneous expert team as the most valuable approach. Nevertheless, if other approaches are proposed, the disclosure of the criteria and the comparison with previous literature should be deemed mandatory to allow effective results reproducibility, interpretation and sharing. |
format | Online Article Text |
id | pubmed-9909946 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-99099462023-02-10 Porcine circovirus 3 (PCV-3) variability: Is it in the virus or in the classification criteria? Franzo, Giovanni Segalés, Joaquim Virol J Comment The continuous discovery of new viruses during the last decades has increased the need for new classification approaches and rules. Currently, the International Committee on Taxonomy of Viruses classifies viruses up to the species level. However, because of the higher variability of most of these infectious agents, a below-species categorization is often required for proper epidemiological investigations. Unfortunately, variable criteria are typically proposed by different research groups, leading to misleading and poorly reproducible results. This scenario occurred for the recently identified Porcine circovirus 3. Although genotype definition standards had been defined by a group of experts in the field, recent articles have been published introducing new genotypes, whose classification rules are not reported. We therefore would like to stress the usefulness of defining and maintaining a common language to allow proper results comparison among groups. We consider the consensus opinion of a heterogeneous expert team as the most valuable approach. Nevertheless, if other approaches are proposed, the disclosure of the criteria and the comparison with previous literature should be deemed mandatory to allow effective results reproducibility, interpretation and sharing. BioMed Central 2023-02-09 /pmc/articles/PMC9909946/ /pubmed/36759848 http://dx.doi.org/10.1186/s12985-023-01984-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Comment Franzo, Giovanni Segalés, Joaquim Porcine circovirus 3 (PCV-3) variability: Is it in the virus or in the classification criteria? |
title | Porcine circovirus 3 (PCV-3) variability: Is it in the virus or in the classification criteria? |
title_full | Porcine circovirus 3 (PCV-3) variability: Is it in the virus or in the classification criteria? |
title_fullStr | Porcine circovirus 3 (PCV-3) variability: Is it in the virus or in the classification criteria? |
title_full_unstemmed | Porcine circovirus 3 (PCV-3) variability: Is it in the virus or in the classification criteria? |
title_short | Porcine circovirus 3 (PCV-3) variability: Is it in the virus or in the classification criteria? |
title_sort | porcine circovirus 3 (pcv-3) variability: is it in the virus or in the classification criteria? |
topic | Comment |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9909946/ https://www.ncbi.nlm.nih.gov/pubmed/36759848 http://dx.doi.org/10.1186/s12985-023-01984-6 |
work_keys_str_mv | AT franzogiovanni porcinecircovirus3pcv3variabilityisitinthevirusorintheclassificationcriteria AT segalesjoaquim porcinecircovirus3pcv3variabilityisitinthevirusorintheclassificationcriteria |