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Prediction of hospitalisations based on wastewater-based SARS-CoV-2 epidemiology

Wastewater-based epidemiology is widely applied in Austria since April 2020 to monitor the SARS-CoV-2 pandemic. With a steadily increasing number of monitored wastewater facilities, 123 plants covering roughly 70 % of the 9 million population were monitored as of August 2022. In this study, the SARS...

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Autores principales: Schenk, Hannes, Heidinger, Petra, Insam, Heribert, Kreuzinger, Norbert, Markt, Rudolf, Nägele, Fabiana, Oberacher, Herbert, Scheffknecht, Christoph, Steinlechner, Martin, Vogl, Gunther, Wagner, Andreas Otto, Rauch, Wolfgang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier B.V. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9911153/
https://www.ncbi.nlm.nih.gov/pubmed/36773921
http://dx.doi.org/10.1016/j.scitotenv.2023.162149
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author Schenk, Hannes
Heidinger, Petra
Insam, Heribert
Kreuzinger, Norbert
Markt, Rudolf
Nägele, Fabiana
Oberacher, Herbert
Scheffknecht, Christoph
Steinlechner, Martin
Vogl, Gunther
Wagner, Andreas Otto
Rauch, Wolfgang
author_facet Schenk, Hannes
Heidinger, Petra
Insam, Heribert
Kreuzinger, Norbert
Markt, Rudolf
Nägele, Fabiana
Oberacher, Herbert
Scheffknecht, Christoph
Steinlechner, Martin
Vogl, Gunther
Wagner, Andreas Otto
Rauch, Wolfgang
author_sort Schenk, Hannes
collection PubMed
description Wastewater-based epidemiology is widely applied in Austria since April 2020 to monitor the SARS-CoV-2 pandemic. With a steadily increasing number of monitored wastewater facilities, 123 plants covering roughly 70 % of the 9 million population were monitored as of August 2022. In this study, the SARS-CoV-2 viral concentrations in raw sewage were analysed to infer short-term hospitalisation occupancy. The temporal lead of wastewater-based epidemiological time series over hospitalisation occupancy levels facilitates the construction of forecast models. Data pre-processing techniques are presented, including the approach of comparing multiple decentralised wastewater signals with aggregated and centralised clinical data. Time‑lead quantification was performed using cross-correlation analysis and coefficient of determination optimisation approaches. Multivariate regression models were successfully applied to infer hospitalisation bed occupancy. The results show a predictive potential of viral loads in sewage towards Covid-19 hospitalisation occupancy, with an average lead time towards ICU and non-ICU bed occupancy between 14.8-17.7 days and 8.6–11.6 days, respectively. The presented procedure provides access to the trend and tipping point behaviour of pandemic dynamics and allows the prediction of short-term demand for public health services. The results showed an increase in forecast accuracy with an increase in the number of monitored wastewater treatment plants. Trained models are sensitive to changing variant types and require recalibration of model parameters, likely caused by immunity by vaccination and/or infection. The utilised approach displays a practical and rapidly implementable application of wastewater-based epidemiology to infer hospitalisation occupancy.
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spelling pubmed-99111532023-02-10 Prediction of hospitalisations based on wastewater-based SARS-CoV-2 epidemiology Schenk, Hannes Heidinger, Petra Insam, Heribert Kreuzinger, Norbert Markt, Rudolf Nägele, Fabiana Oberacher, Herbert Scheffknecht, Christoph Steinlechner, Martin Vogl, Gunther Wagner, Andreas Otto Rauch, Wolfgang Sci Total Environ Article Wastewater-based epidemiology is widely applied in Austria since April 2020 to monitor the SARS-CoV-2 pandemic. With a steadily increasing number of monitored wastewater facilities, 123 plants covering roughly 70 % of the 9 million population were monitored as of August 2022. In this study, the SARS-CoV-2 viral concentrations in raw sewage were analysed to infer short-term hospitalisation occupancy. The temporal lead of wastewater-based epidemiological time series over hospitalisation occupancy levels facilitates the construction of forecast models. Data pre-processing techniques are presented, including the approach of comparing multiple decentralised wastewater signals with aggregated and centralised clinical data. Time‑lead quantification was performed using cross-correlation analysis and coefficient of determination optimisation approaches. Multivariate regression models were successfully applied to infer hospitalisation bed occupancy. The results show a predictive potential of viral loads in sewage towards Covid-19 hospitalisation occupancy, with an average lead time towards ICU and non-ICU bed occupancy between 14.8-17.7 days and 8.6–11.6 days, respectively. The presented procedure provides access to the trend and tipping point behaviour of pandemic dynamics and allows the prediction of short-term demand for public health services. The results showed an increase in forecast accuracy with an increase in the number of monitored wastewater treatment plants. Trained models are sensitive to changing variant types and require recalibration of model parameters, likely caused by immunity by vaccination and/or infection. The utilised approach displays a practical and rapidly implementable application of wastewater-based epidemiology to infer hospitalisation occupancy. The Authors. Published by Elsevier B.V. 2023-05-15 2023-02-10 /pmc/articles/PMC9911153/ /pubmed/36773921 http://dx.doi.org/10.1016/j.scitotenv.2023.162149 Text en © 2023 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Schenk, Hannes
Heidinger, Petra
Insam, Heribert
Kreuzinger, Norbert
Markt, Rudolf
Nägele, Fabiana
Oberacher, Herbert
Scheffknecht, Christoph
Steinlechner, Martin
Vogl, Gunther
Wagner, Andreas Otto
Rauch, Wolfgang
Prediction of hospitalisations based on wastewater-based SARS-CoV-2 epidemiology
title Prediction of hospitalisations based on wastewater-based SARS-CoV-2 epidemiology
title_full Prediction of hospitalisations based on wastewater-based SARS-CoV-2 epidemiology
title_fullStr Prediction of hospitalisations based on wastewater-based SARS-CoV-2 epidemiology
title_full_unstemmed Prediction of hospitalisations based on wastewater-based SARS-CoV-2 epidemiology
title_short Prediction of hospitalisations based on wastewater-based SARS-CoV-2 epidemiology
title_sort prediction of hospitalisations based on wastewater-based sars-cov-2 epidemiology
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9911153/
https://www.ncbi.nlm.nih.gov/pubmed/36773921
http://dx.doi.org/10.1016/j.scitotenv.2023.162149
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