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Construction of a serum diagnostic signature based on m5C-related miRNAs for cancer detection

Currently, no clinically relevant non-invasive biomarkers are available for screening of multiple cancer types. In this study, we developed a serum diagnostic signature based on 5-methylcytosine (m5C)-related miRNAs (m5C-miRNAs) for multiple-cancer detection. Serum miRNA expression data and the corr...

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Autores principales: Tang, Fuzhou, Liu, Yang, Sun, Yichi, Xiong, Yu, Gu, Yan, Zhou, Jing, Ouyang, Yan, Zhang, Shichao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9911864/
https://www.ncbi.nlm.nih.gov/pubmed/36777349
http://dx.doi.org/10.3389/fendo.2023.1099703
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author Tang, Fuzhou
Liu, Yang
Sun, Yichi
Xiong, Yu
Gu, Yan
Zhou, Jing
Ouyang, Yan
Zhang, Shichao
author_facet Tang, Fuzhou
Liu, Yang
Sun, Yichi
Xiong, Yu
Gu, Yan
Zhou, Jing
Ouyang, Yan
Zhang, Shichao
author_sort Tang, Fuzhou
collection PubMed
description Currently, no clinically relevant non-invasive biomarkers are available for screening of multiple cancer types. In this study, we developed a serum diagnostic signature based on 5-methylcytosine (m5C)-related miRNAs (m5C-miRNAs) for multiple-cancer detection. Serum miRNA expression data and the corresponding clinical information of patients were collected from the Gene Expression Omnibus database. Serum samples were then randomly assigned to the training or validation cohort at a 1:1 ratio. Using the identified m5C-miRNAs, an m5C-miRNA signature for cancer detection was established using a support vector machine algorithm. The constructed m5C-miRNA signature displayed excellent accuracy, and its areas under the curve were 0.977, 0.934, and 0.965 in the training cohort, validation cohort, and combined training and validation cohort, respectively. Moreover, the diagnostic capability of the m5C-miRNA signature was unaffected by patient age or sex or the presence of noncancerous disease. The m5C-miRNA signature also displayed satisfactory performance for distinguishing tumor types. Importantly, in the detection of early-stage cancers, the diagnostic performance of the m5C-miRNA signature was obviously superior to that of conventional tumor biomarkers. In summary, this work revealed the value of serum m5C-miRNAs in cancer detection and provided a new strategy for developing non-invasive and cost effective tools for large-scale cancer screening.
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spelling pubmed-99118642023-02-11 Construction of a serum diagnostic signature based on m5C-related miRNAs for cancer detection Tang, Fuzhou Liu, Yang Sun, Yichi Xiong, Yu Gu, Yan Zhou, Jing Ouyang, Yan Zhang, Shichao Front Endocrinol (Lausanne) Endocrinology Currently, no clinically relevant non-invasive biomarkers are available for screening of multiple cancer types. In this study, we developed a serum diagnostic signature based on 5-methylcytosine (m5C)-related miRNAs (m5C-miRNAs) for multiple-cancer detection. Serum miRNA expression data and the corresponding clinical information of patients were collected from the Gene Expression Omnibus database. Serum samples were then randomly assigned to the training or validation cohort at a 1:1 ratio. Using the identified m5C-miRNAs, an m5C-miRNA signature for cancer detection was established using a support vector machine algorithm. The constructed m5C-miRNA signature displayed excellent accuracy, and its areas under the curve were 0.977, 0.934, and 0.965 in the training cohort, validation cohort, and combined training and validation cohort, respectively. Moreover, the diagnostic capability of the m5C-miRNA signature was unaffected by patient age or sex or the presence of noncancerous disease. The m5C-miRNA signature also displayed satisfactory performance for distinguishing tumor types. Importantly, in the detection of early-stage cancers, the diagnostic performance of the m5C-miRNA signature was obviously superior to that of conventional tumor biomarkers. In summary, this work revealed the value of serum m5C-miRNAs in cancer detection and provided a new strategy for developing non-invasive and cost effective tools for large-scale cancer screening. Frontiers Media S.A. 2023-01-27 /pmc/articles/PMC9911864/ /pubmed/36777349 http://dx.doi.org/10.3389/fendo.2023.1099703 Text en Copyright © 2023 Tang, Liu, Sun, Xiong, Gu, Zhou, Ouyang and Zhang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Endocrinology
Tang, Fuzhou
Liu, Yang
Sun, Yichi
Xiong, Yu
Gu, Yan
Zhou, Jing
Ouyang, Yan
Zhang, Shichao
Construction of a serum diagnostic signature based on m5C-related miRNAs for cancer detection
title Construction of a serum diagnostic signature based on m5C-related miRNAs for cancer detection
title_full Construction of a serum diagnostic signature based on m5C-related miRNAs for cancer detection
title_fullStr Construction of a serum diagnostic signature based on m5C-related miRNAs for cancer detection
title_full_unstemmed Construction of a serum diagnostic signature based on m5C-related miRNAs for cancer detection
title_short Construction of a serum diagnostic signature based on m5C-related miRNAs for cancer detection
title_sort construction of a serum diagnostic signature based on m5c-related mirnas for cancer detection
topic Endocrinology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9911864/
https://www.ncbi.nlm.nih.gov/pubmed/36777349
http://dx.doi.org/10.3389/fendo.2023.1099703
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