Cargando…

An integrated in-silico Pharmaco-BioInformatics approaches to identify synergistic effects of COVID-19 to HIV patients

BACKGROUND: With high inflammatory states from both COVID-19 and HIV conditions further result in complications. The ongoing confrontation between these two viral infections can be avoided by adopting suitable management measures. PURPOSE: The aim of this study was to figure out the pharmacological...

Descripción completa

Detalles Bibliográficos
Autores principales: Hossain, Md Arju, Rahman, Md Habibur, Sultana, Habiba, Ahsan, Asif, Rayhan, Saiful Islam, Hasan, Md Imran, Sohel, Md, Somadder, Pratul Dipta, Moni, Mohammad Ali
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier Ltd. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9911982/
https://www.ncbi.nlm.nih.gov/pubmed/36805222
http://dx.doi.org/10.1016/j.compbiomed.2023.106656
_version_ 1784885113388007424
author Hossain, Md Arju
Rahman, Md Habibur
Sultana, Habiba
Ahsan, Asif
Rayhan, Saiful Islam
Hasan, Md Imran
Sohel, Md
Somadder, Pratul Dipta
Moni, Mohammad Ali
author_facet Hossain, Md Arju
Rahman, Md Habibur
Sultana, Habiba
Ahsan, Asif
Rayhan, Saiful Islam
Hasan, Md Imran
Sohel, Md
Somadder, Pratul Dipta
Moni, Mohammad Ali
author_sort Hossain, Md Arju
collection PubMed
description BACKGROUND: With high inflammatory states from both COVID-19 and HIV conditions further result in complications. The ongoing confrontation between these two viral infections can be avoided by adopting suitable management measures. PURPOSE: The aim of this study was to figure out the pharmacological mechanism behind apigenin's role in the synergetic effects of COVID-19 to the progression of HIV patients. METHOD: We employed computer-aided methods to uncover similar biological targets and signaling pathways associated with COVID-19 and HIV, along with bioinformatics and network pharmacology techniques to assess the synergetic effects of apigenin on COVID-19 to the progression of HIV, as well as pharmacokinetics analysis to examine apigenin's safety in the human body. RESULT: Stress-responsive, membrane receptor, and induction pathways were mostly involved in gene ontology (GO) pathways, whereas apoptosis and inflammatory pathways were significantly associated in the Kyoto encyclopedia of genes and genomes (KEGG). The top 20 hub genes were detected utilizing the shortest path ranked by degree method and protein-protein interaction (PPI), as well as molecular docking and molecular dynamics simulation were performed, revealing apigenin's strong interaction with hub proteins (MAPK3, RELA, MAPK1, EP300, and AKT1). Moreover, the pharmacokinetic features of apigenin revealed that it is an effective therapeutic agent with minimal adverse effects, for instance, hepatoxicity. CONCLUSION: Synergetic effects of COVID-19 on the progression of HIV may still be a danger to global public health. Consequently, advanced solutions are required to give valid information regarding apigenin as a suitable therapeutic agent for the management of COVID-19 and HIV synergetic effects. However, the findings have yet to be confirmed in patients, suggesting more in vitro and in vivo studies.
format Online
Article
Text
id pubmed-9911982
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher The Authors. Published by Elsevier Ltd.
record_format MEDLINE/PubMed
spelling pubmed-99119822023-02-10 An integrated in-silico Pharmaco-BioInformatics approaches to identify synergistic effects of COVID-19 to HIV patients Hossain, Md Arju Rahman, Md Habibur Sultana, Habiba Ahsan, Asif Rayhan, Saiful Islam Hasan, Md Imran Sohel, Md Somadder, Pratul Dipta Moni, Mohammad Ali Comput Biol Med Article BACKGROUND: With high inflammatory states from both COVID-19 and HIV conditions further result in complications. The ongoing confrontation between these two viral infections can be avoided by adopting suitable management measures. PURPOSE: The aim of this study was to figure out the pharmacological mechanism behind apigenin's role in the synergetic effects of COVID-19 to the progression of HIV patients. METHOD: We employed computer-aided methods to uncover similar biological targets and signaling pathways associated with COVID-19 and HIV, along with bioinformatics and network pharmacology techniques to assess the synergetic effects of apigenin on COVID-19 to the progression of HIV, as well as pharmacokinetics analysis to examine apigenin's safety in the human body. RESULT: Stress-responsive, membrane receptor, and induction pathways were mostly involved in gene ontology (GO) pathways, whereas apoptosis and inflammatory pathways were significantly associated in the Kyoto encyclopedia of genes and genomes (KEGG). The top 20 hub genes were detected utilizing the shortest path ranked by degree method and protein-protein interaction (PPI), as well as molecular docking and molecular dynamics simulation were performed, revealing apigenin's strong interaction with hub proteins (MAPK3, RELA, MAPK1, EP300, and AKT1). Moreover, the pharmacokinetic features of apigenin revealed that it is an effective therapeutic agent with minimal adverse effects, for instance, hepatoxicity. CONCLUSION: Synergetic effects of COVID-19 on the progression of HIV may still be a danger to global public health. Consequently, advanced solutions are required to give valid information regarding apigenin as a suitable therapeutic agent for the management of COVID-19 and HIV synergetic effects. However, the findings have yet to be confirmed in patients, suggesting more in vitro and in vivo studies. The Authors. Published by Elsevier Ltd. 2023-03 2023-02-10 /pmc/articles/PMC9911982/ /pubmed/36805222 http://dx.doi.org/10.1016/j.compbiomed.2023.106656 Text en © 2023 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Hossain, Md Arju
Rahman, Md Habibur
Sultana, Habiba
Ahsan, Asif
Rayhan, Saiful Islam
Hasan, Md Imran
Sohel, Md
Somadder, Pratul Dipta
Moni, Mohammad Ali
An integrated in-silico Pharmaco-BioInformatics approaches to identify synergistic effects of COVID-19 to HIV patients
title An integrated in-silico Pharmaco-BioInformatics approaches to identify synergistic effects of COVID-19 to HIV patients
title_full An integrated in-silico Pharmaco-BioInformatics approaches to identify synergistic effects of COVID-19 to HIV patients
title_fullStr An integrated in-silico Pharmaco-BioInformatics approaches to identify synergistic effects of COVID-19 to HIV patients
title_full_unstemmed An integrated in-silico Pharmaco-BioInformatics approaches to identify synergistic effects of COVID-19 to HIV patients
title_short An integrated in-silico Pharmaco-BioInformatics approaches to identify synergistic effects of COVID-19 to HIV patients
title_sort integrated in-silico pharmaco-bioinformatics approaches to identify synergistic effects of covid-19 to hiv patients
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9911982/
https://www.ncbi.nlm.nih.gov/pubmed/36805222
http://dx.doi.org/10.1016/j.compbiomed.2023.106656
work_keys_str_mv AT hossainmdarju anintegratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT rahmanmdhabibur anintegratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT sultanahabiba anintegratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT ahsanasif anintegratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT rayhansaifulislam anintegratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT hasanmdimran anintegratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT sohelmd anintegratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT somadderpratuldipta anintegratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT monimohammadali anintegratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT hossainmdarju integratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT rahmanmdhabibur integratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT sultanahabiba integratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT ahsanasif integratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT rayhansaifulislam integratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT hasanmdimran integratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT sohelmd integratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT somadderpratuldipta integratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients
AT monimohammadali integratedinsilicopharmacobioinformaticsapproachestoidentifysynergisticeffectsofcovid19tohivpatients