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Methyl 1-[(6-meth­oxy-5-methyl­pyrimidin-4-yl)meth­yl]-1H-benzo[d]imidazole-7-carboxyl­ate: a combined X-ray and DFT study

The title compound, C(16)H(16)N(4)O(3), was obtained as a side product during the synthesis of the previously reported anti­tubercular agent N-(2-fluoro­eth­yl)-1-[(6-meth­oxy-5-methyl­pyrimidin-4-yl)meth­yl]-1H-benzo[d]imidazole-4-carboxamide and structurally characterized by X-ray crystallography...

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Detalles Bibliográficos
Autores principales: Richter, Adrian, Goddard, Richard, Schönefeld, Roy, Imming, Peter, Seidel, Rüdiger W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9912325/
https://www.ncbi.nlm.nih.gov/pubmed/36794056
http://dx.doi.org/10.1107/S2414314623000251
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author Richter, Adrian
Goddard, Richard
Schönefeld, Roy
Imming, Peter
Seidel, Rüdiger W.
author_facet Richter, Adrian
Goddard, Richard
Schönefeld, Roy
Imming, Peter
Seidel, Rüdiger W.
author_sort Richter, Adrian
collection PubMed
description The title compound, C(16)H(16)N(4)O(3), was obtained as a side product during the synthesis of the previously reported anti­tubercular agent N-(2-fluoro­eth­yl)-1-[(6-meth­oxy-5-methyl­pyrimidin-4-yl)meth­yl]-1H-benzo[d]imidazole-4-carboxamide and structurally characterized by X-ray crystallography and computational methods. In the crystal (space group P2(1)/n, Z = 4), the title compound adopts a twisted conformation with a dihedral angle between the benzimidazole and pyrimidine mean planes of 84.11 (3)°. The carboxyl­ate group and the 5-methyl group on the pyrimidine ring exhibit partial disorder. The DFT-optimized mol­ecular structure resembles the structure of the minor component in the crystal. [Image: see text]
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spelling pubmed-99123252023-02-14 Methyl 1-[(6-meth­oxy-5-methyl­pyrimidin-4-yl)meth­yl]-1H-benzo[d]imidazole-7-carboxyl­ate: a combined X-ray and DFT study Richter, Adrian Goddard, Richard Schönefeld, Roy Imming, Peter Seidel, Rüdiger W. IUCrdata Data Reports The title compound, C(16)H(16)N(4)O(3), was obtained as a side product during the synthesis of the previously reported anti­tubercular agent N-(2-fluoro­eth­yl)-1-[(6-meth­oxy-5-methyl­pyrimidin-4-yl)meth­yl]-1H-benzo[d]imidazole-4-carboxamide and structurally characterized by X-ray crystallography and computational methods. In the crystal (space group P2(1)/n, Z = 4), the title compound adopts a twisted conformation with a dihedral angle between the benzimidazole and pyrimidine mean planes of 84.11 (3)°. The carboxyl­ate group and the 5-methyl group on the pyrimidine ring exhibit partial disorder. The DFT-optimized mol­ecular structure resembles the structure of the minor component in the crystal. [Image: see text] International Union of Crystallography 2023-01-12 /pmc/articles/PMC9912325/ /pubmed/36794056 http://dx.doi.org/10.1107/S2414314623000251 Text en © Richter et al. 2023 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Data Reports
Richter, Adrian
Goddard, Richard
Schönefeld, Roy
Imming, Peter
Seidel, Rüdiger W.
Methyl 1-[(6-meth­oxy-5-methyl­pyrimidin-4-yl)meth­yl]-1H-benzo[d]imidazole-7-carboxyl­ate: a combined X-ray and DFT study
title Methyl 1-[(6-meth­oxy-5-methyl­pyrimidin-4-yl)meth­yl]-1H-benzo[d]imidazole-7-carboxyl­ate: a combined X-ray and DFT study
title_full Methyl 1-[(6-meth­oxy-5-methyl­pyrimidin-4-yl)meth­yl]-1H-benzo[d]imidazole-7-carboxyl­ate: a combined X-ray and DFT study
title_fullStr Methyl 1-[(6-meth­oxy-5-methyl­pyrimidin-4-yl)meth­yl]-1H-benzo[d]imidazole-7-carboxyl­ate: a combined X-ray and DFT study
title_full_unstemmed Methyl 1-[(6-meth­oxy-5-methyl­pyrimidin-4-yl)meth­yl]-1H-benzo[d]imidazole-7-carboxyl­ate: a combined X-ray and DFT study
title_short Methyl 1-[(6-meth­oxy-5-methyl­pyrimidin-4-yl)meth­yl]-1H-benzo[d]imidazole-7-carboxyl­ate: a combined X-ray and DFT study
title_sort methyl 1-[(6-meth­oxy-5-methyl­pyrimidin-4-yl)meth­yl]-1h-benzo[d]imidazole-7-carboxyl­ate: a combined x-ray and dft study
topic Data Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9912325/
https://www.ncbi.nlm.nih.gov/pubmed/36794056
http://dx.doi.org/10.1107/S2414314623000251
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