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Crystal structure of the insecticide ethiprole (C(13)H(9)Cl(2)F(3)N(4)OS): a case study of whole-molecule configurational disorder
The crystal structure of ethiprole {systematic name: 5-amino-1-[2,6-dichloro-4-(trifluoromethyl)phenyl]-4-ethanesulfinyl-1H-imidazole-3-carbonitrile}, C(13)H(9)Cl(2)F(3)N(4)OS, a phenylpyrazole-based insecticide, is presented. The pyrazole ring carries four substituents: an N-bound 2,6-dich...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9912465/ https://www.ncbi.nlm.nih.gov/pubmed/36793412 http://dx.doi.org/10.1107/S205698902300035X |
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author | Vinaya, Basavaraju, Yeriyur B. Srinivasa, Gejjelegere R. Shreenivas, Mellekatte T. Yathirajan, Hemmige S. Parkin, Sean |
author_facet | Vinaya, Basavaraju, Yeriyur B. Srinivasa, Gejjelegere R. Shreenivas, Mellekatte T. Yathirajan, Hemmige S. Parkin, Sean |
author_sort | Vinaya, |
collection | PubMed |
description | The crystal structure of ethiprole {systematic name: 5-amino-1-[2,6-dichloro-4-(trifluoromethyl)phenyl]-4-ethanesulfinyl-1H-imidazole-3-carbonitrile}, C(13)H(9)Cl(2)F(3)N(4)OS, a phenylpyrazole-based insecticide, is presented. The pyrazole ring carries four substituents: an N-bound 2,6-dichloro-4-trifluoromethylphenyl ring and C-bound amine, ethanesulfinyl, and cyano groups. The sulfur atom of the ethanesulfinyl group is trigonal–pyramidal and stereogenic. The structure exhibits whole-molecule configurational disorder due to superposition of enantiomers. The crystal packing is dominated by strong N—H⋯O and N—H⋯N hydrogen bonds, which form R (4) (4)(18) and R (2) (2)(12) ring motifs. Since the ethiprole molecule is quite small, and structure solution and refinement were straightforward, the structure presents a convenient instructional example for modelling whole-body disorder of a non-rigid molecule. To this end, a step-by-step overview of the model-building and refinement process is also given. The structure could form the basis of a useful classroom, practical, or workshop-style example. |
format | Online Article Text |
id | pubmed-9912465 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-99124652023-02-14 Crystal structure of the insecticide ethiprole (C(13)H(9)Cl(2)F(3)N(4)OS): a case study of whole-molecule configurational disorder Vinaya, Basavaraju, Yeriyur B. Srinivasa, Gejjelegere R. Shreenivas, Mellekatte T. Yathirajan, Hemmige S. Parkin, Sean Acta Crystallogr E Crystallogr Commun Modern Approaches and Tools for Teaching Crystallography The crystal structure of ethiprole {systematic name: 5-amino-1-[2,6-dichloro-4-(trifluoromethyl)phenyl]-4-ethanesulfinyl-1H-imidazole-3-carbonitrile}, C(13)H(9)Cl(2)F(3)N(4)OS, a phenylpyrazole-based insecticide, is presented. The pyrazole ring carries four substituents: an N-bound 2,6-dichloro-4-trifluoromethylphenyl ring and C-bound amine, ethanesulfinyl, and cyano groups. The sulfur atom of the ethanesulfinyl group is trigonal–pyramidal and stereogenic. The structure exhibits whole-molecule configurational disorder due to superposition of enantiomers. The crystal packing is dominated by strong N—H⋯O and N—H⋯N hydrogen bonds, which form R (4) (4)(18) and R (2) (2)(12) ring motifs. Since the ethiprole molecule is quite small, and structure solution and refinement were straightforward, the structure presents a convenient instructional example for modelling whole-body disorder of a non-rigid molecule. To this end, a step-by-step overview of the model-building and refinement process is also given. The structure could form the basis of a useful classroom, practical, or workshop-style example. International Union of Crystallography 2023-01-19 /pmc/articles/PMC9912465/ /pubmed/36793412 http://dx.doi.org/10.1107/S205698902300035X Text en © Vinaya et al. 2023 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Modern Approaches and Tools for Teaching Crystallography Vinaya, Basavaraju, Yeriyur B. Srinivasa, Gejjelegere R. Shreenivas, Mellekatte T. Yathirajan, Hemmige S. Parkin, Sean Crystal structure of the insecticide ethiprole (C(13)H(9)Cl(2)F(3)N(4)OS): a case study of whole-molecule configurational disorder |
title | Crystal structure of the insecticide ethiprole (C(13)H(9)Cl(2)F(3)N(4)OS): a case study of whole-molecule configurational disorder |
title_full | Crystal structure of the insecticide ethiprole (C(13)H(9)Cl(2)F(3)N(4)OS): a case study of whole-molecule configurational disorder |
title_fullStr | Crystal structure of the insecticide ethiprole (C(13)H(9)Cl(2)F(3)N(4)OS): a case study of whole-molecule configurational disorder |
title_full_unstemmed | Crystal structure of the insecticide ethiprole (C(13)H(9)Cl(2)F(3)N(4)OS): a case study of whole-molecule configurational disorder |
title_short | Crystal structure of the insecticide ethiprole (C(13)H(9)Cl(2)F(3)N(4)OS): a case study of whole-molecule configurational disorder |
title_sort | crystal structure of the insecticide ethiprole (c(13)h(9)cl(2)f(3)n(4)os): a case study of whole-molecule configurational disorder |
topic | Modern Approaches and Tools for Teaching Crystallography |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9912465/ https://www.ncbi.nlm.nih.gov/pubmed/36793412 http://dx.doi.org/10.1107/S205698902300035X |
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