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Development of a keyword library for capturing PRO-CTCAE-focused “symptom talk” in oncology conversations
OBJECTIVES: As computational methods for detecting symptoms can help us better attend to patient suffering, the objectives of this study were to develop and evaluate the performance of a natural language processing keyword library for detecting symptom talk, and to describe symptom communication wit...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9912707/ https://www.ncbi.nlm.nih.gov/pubmed/36789287 http://dx.doi.org/10.1093/jamiaopen/ooad009 |
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author | Durieux, Brigitte N Zverev, Samuel R Tarbi, Elise C Kwok, Anne Sciacca, Kate Pollak, Kathryn I Tulsky, James A Lindvall, Charlotta |
author_facet | Durieux, Brigitte N Zverev, Samuel R Tarbi, Elise C Kwok, Anne Sciacca, Kate Pollak, Kathryn I Tulsky, James A Lindvall, Charlotta |
author_sort | Durieux, Brigitte N |
collection | PubMed |
description | OBJECTIVES: As computational methods for detecting symptoms can help us better attend to patient suffering, the objectives of this study were to develop and evaluate the performance of a natural language processing keyword library for detecting symptom talk, and to describe symptom communication within our dataset to generate insights for future model building. MATERIALS AND METHODS: This was a secondary analysis of 121 transcribed outpatient oncology conversations from the Communication in Oncologist-Patient Encounters trial. Through an iterative process of identifying symptom expressions via inductive and deductive techniques, we generated a library of keywords relevant to the Patient-Reported Outcome version of the Common Terminology Criteria for Adverse Events (PRO-CTCAE) framework from 90 conversations, and tested the library on 31 additional transcripts. To contextualize symptom expressions and the nature of misclassifications, we qualitatively analyzed 450 mislabeled and properly labeled symptom-positive turns. RESULTS: The final library, comprising 1320 terms, identified symptom talk among conversation turns with an F1 of 0.82 against a PRO-CTCAE-focused gold standard, and an F1 of 0.61 against a broad gold standard. Qualitative observations suggest that physical symptoms are more easily detected than psychological symptoms (eg, anxiety), and ambiguity persists throughout symptom communication. DISCUSSION: This rudimentary keyword library captures most PRO-CTCAE-focused symptom talk, but the ambiguity of symptom speech limits the utility of rule-based methods alone, and limits to generalizability must be considered. CONCLUSION: Our findings highlight opportunities for more advanced computational models to detect symptom expressions from transcribed clinical conversations. Future improvements in speech-to-text could enable real-time detection at scale. |
format | Online Article Text |
id | pubmed-9912707 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-99127072023-02-13 Development of a keyword library for capturing PRO-CTCAE-focused “symptom talk” in oncology conversations Durieux, Brigitte N Zverev, Samuel R Tarbi, Elise C Kwok, Anne Sciacca, Kate Pollak, Kathryn I Tulsky, James A Lindvall, Charlotta JAMIA Open Research and Applications OBJECTIVES: As computational methods for detecting symptoms can help us better attend to patient suffering, the objectives of this study were to develop and evaluate the performance of a natural language processing keyword library for detecting symptom talk, and to describe symptom communication within our dataset to generate insights for future model building. MATERIALS AND METHODS: This was a secondary analysis of 121 transcribed outpatient oncology conversations from the Communication in Oncologist-Patient Encounters trial. Through an iterative process of identifying symptom expressions via inductive and deductive techniques, we generated a library of keywords relevant to the Patient-Reported Outcome version of the Common Terminology Criteria for Adverse Events (PRO-CTCAE) framework from 90 conversations, and tested the library on 31 additional transcripts. To contextualize symptom expressions and the nature of misclassifications, we qualitatively analyzed 450 mislabeled and properly labeled symptom-positive turns. RESULTS: The final library, comprising 1320 terms, identified symptom talk among conversation turns with an F1 of 0.82 against a PRO-CTCAE-focused gold standard, and an F1 of 0.61 against a broad gold standard. Qualitative observations suggest that physical symptoms are more easily detected than psychological symptoms (eg, anxiety), and ambiguity persists throughout symptom communication. DISCUSSION: This rudimentary keyword library captures most PRO-CTCAE-focused symptom talk, but the ambiguity of symptom speech limits the utility of rule-based methods alone, and limits to generalizability must be considered. CONCLUSION: Our findings highlight opportunities for more advanced computational models to detect symptom expressions from transcribed clinical conversations. Future improvements in speech-to-text could enable real-time detection at scale. Oxford University Press 2023-02-09 /pmc/articles/PMC9912707/ /pubmed/36789287 http://dx.doi.org/10.1093/jamiaopen/ooad009 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of the American Medical Informatics Association. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research and Applications Durieux, Brigitte N Zverev, Samuel R Tarbi, Elise C Kwok, Anne Sciacca, Kate Pollak, Kathryn I Tulsky, James A Lindvall, Charlotta Development of a keyword library for capturing PRO-CTCAE-focused “symptom talk” in oncology conversations |
title | Development of a keyword library for capturing PRO-CTCAE-focused “symptom talk” in oncology conversations |
title_full | Development of a keyword library for capturing PRO-CTCAE-focused “symptom talk” in oncology conversations |
title_fullStr | Development of a keyword library for capturing PRO-CTCAE-focused “symptom talk” in oncology conversations |
title_full_unstemmed | Development of a keyword library for capturing PRO-CTCAE-focused “symptom talk” in oncology conversations |
title_short | Development of a keyword library for capturing PRO-CTCAE-focused “symptom talk” in oncology conversations |
title_sort | development of a keyword library for capturing pro-ctcae-focused “symptom talk” in oncology conversations |
topic | Research and Applications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9912707/ https://www.ncbi.nlm.nih.gov/pubmed/36789287 http://dx.doi.org/10.1093/jamiaopen/ooad009 |
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