Cargando…
Coronavirus Immunotherapeutic Consortium Database
The coronavirus disease 2019 (COVID-19) pandemic caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has seen multiple anti-SARS-CoV-2 antibodies being generated globally. It is difficult, however, to assemble a useful compendium of these biological properties if they are deri...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9913043/ https://www.ncbi.nlm.nih.gov/pubmed/36763096 http://dx.doi.org/10.1093/database/baac112 |
_version_ | 1784885332454408192 |
---|---|
author | Mahita, Jarjapu Ha, Brendan Gambiez, Anais Schendel, Sharon L Li, Haoyang Hastie, Kathryn M Dennison, S Moses Li, Kan Kuzmina, Natalia Periasamy, Sivakumar Bukreyev, Alexander Munt, Jennifer E Osei-Twum, Mary Atyeo, Caroline Overton, James A Vita, Randi Guzman-Orozco, Hector Mendes, Marcus Kojima, Mari Halfmann, Peter J Kawaoka, Yoshihiro Alter, Galit Gagnon, Luc Baric, Ralph S Tomaras, Georgia D Germann, Tim Bedinger, Daniel Greenbaum, Jason A Saphire, Erica Ollmann Peters, Bjoern |
author_facet | Mahita, Jarjapu Ha, Brendan Gambiez, Anais Schendel, Sharon L Li, Haoyang Hastie, Kathryn M Dennison, S Moses Li, Kan Kuzmina, Natalia Periasamy, Sivakumar Bukreyev, Alexander Munt, Jennifer E Osei-Twum, Mary Atyeo, Caroline Overton, James A Vita, Randi Guzman-Orozco, Hector Mendes, Marcus Kojima, Mari Halfmann, Peter J Kawaoka, Yoshihiro Alter, Galit Gagnon, Luc Baric, Ralph S Tomaras, Georgia D Germann, Tim Bedinger, Daniel Greenbaum, Jason A Saphire, Erica Ollmann Peters, Bjoern |
author_sort | Mahita, Jarjapu |
collection | PubMed |
description | The coronavirus disease 2019 (COVID-19) pandemic caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has seen multiple anti-SARS-CoV-2 antibodies being generated globally. It is difficult, however, to assemble a useful compendium of these biological properties if they are derived from experimental measurements performed at different sites under different experimental conditions. The Coronavirus Immunotherapeutic Consortium (COVIC) circumvents these issues by experimentally testing blinded antibodies side by side for several functional activities. To collect these data in a consistent fashion and make it publicly available, we established the COVIC database (COVIC-DB, https://covicdb.lji.org/). This database enables systematic analysis and interpretation of this large-scale dataset by providing a comprehensive view of various features such as affinity, neutralization, in vivo protection and effector functions for each antibody. Interactive graphs enable direct comparisons of antibodies based on select functional properties. We demonstrate how the COVIC-DB can be utilized to examine relationships among antibody features, thereby guiding the design of therapeutic antibody cocktails. Database URL https://covicdb.lji.org/ |
format | Online Article Text |
id | pubmed-9913043 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-99130432023-02-13 Coronavirus Immunotherapeutic Consortium Database Mahita, Jarjapu Ha, Brendan Gambiez, Anais Schendel, Sharon L Li, Haoyang Hastie, Kathryn M Dennison, S Moses Li, Kan Kuzmina, Natalia Periasamy, Sivakumar Bukreyev, Alexander Munt, Jennifer E Osei-Twum, Mary Atyeo, Caroline Overton, James A Vita, Randi Guzman-Orozco, Hector Mendes, Marcus Kojima, Mari Halfmann, Peter J Kawaoka, Yoshihiro Alter, Galit Gagnon, Luc Baric, Ralph S Tomaras, Georgia D Germann, Tim Bedinger, Daniel Greenbaum, Jason A Saphire, Erica Ollmann Peters, Bjoern Database (Oxford) Original Article The coronavirus disease 2019 (COVID-19) pandemic caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has seen multiple anti-SARS-CoV-2 antibodies being generated globally. It is difficult, however, to assemble a useful compendium of these biological properties if they are derived from experimental measurements performed at different sites under different experimental conditions. The Coronavirus Immunotherapeutic Consortium (COVIC) circumvents these issues by experimentally testing blinded antibodies side by side for several functional activities. To collect these data in a consistent fashion and make it publicly available, we established the COVIC database (COVIC-DB, https://covicdb.lji.org/). This database enables systematic analysis and interpretation of this large-scale dataset by providing a comprehensive view of various features such as affinity, neutralization, in vivo protection and effector functions for each antibody. Interactive graphs enable direct comparisons of antibodies based on select functional properties. We demonstrate how the COVIC-DB can be utilized to examine relationships among antibody features, thereby guiding the design of therapeutic antibody cocktails. Database URL https://covicdb.lji.org/ Oxford University Press 2023-02-10 /pmc/articles/PMC9913043/ /pubmed/36763096 http://dx.doi.org/10.1093/database/baac112 Text en © The Author(s) 2023. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Mahita, Jarjapu Ha, Brendan Gambiez, Anais Schendel, Sharon L Li, Haoyang Hastie, Kathryn M Dennison, S Moses Li, Kan Kuzmina, Natalia Periasamy, Sivakumar Bukreyev, Alexander Munt, Jennifer E Osei-Twum, Mary Atyeo, Caroline Overton, James A Vita, Randi Guzman-Orozco, Hector Mendes, Marcus Kojima, Mari Halfmann, Peter J Kawaoka, Yoshihiro Alter, Galit Gagnon, Luc Baric, Ralph S Tomaras, Georgia D Germann, Tim Bedinger, Daniel Greenbaum, Jason A Saphire, Erica Ollmann Peters, Bjoern Coronavirus Immunotherapeutic Consortium Database |
title | Coronavirus Immunotherapeutic Consortium Database |
title_full | Coronavirus Immunotherapeutic Consortium Database |
title_fullStr | Coronavirus Immunotherapeutic Consortium Database |
title_full_unstemmed | Coronavirus Immunotherapeutic Consortium Database |
title_short | Coronavirus Immunotherapeutic Consortium Database |
title_sort | coronavirus immunotherapeutic consortium database |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9913043/ https://www.ncbi.nlm.nih.gov/pubmed/36763096 http://dx.doi.org/10.1093/database/baac112 |
work_keys_str_mv | AT mahitajarjapu coronavirusimmunotherapeuticconsortiumdatabase AT habrendan coronavirusimmunotherapeuticconsortiumdatabase AT gambiezanais coronavirusimmunotherapeuticconsortiumdatabase AT schendelsharonl coronavirusimmunotherapeuticconsortiumdatabase AT lihaoyang coronavirusimmunotherapeuticconsortiumdatabase AT hastiekathrynm coronavirusimmunotherapeuticconsortiumdatabase AT dennisonsmoses coronavirusimmunotherapeuticconsortiumdatabase AT likan coronavirusimmunotherapeuticconsortiumdatabase AT kuzminanatalia coronavirusimmunotherapeuticconsortiumdatabase AT periasamysivakumar coronavirusimmunotherapeuticconsortiumdatabase AT bukreyevalexander coronavirusimmunotherapeuticconsortiumdatabase AT muntjennifere coronavirusimmunotherapeuticconsortiumdatabase AT oseitwummary coronavirusimmunotherapeuticconsortiumdatabase AT atyeocaroline coronavirusimmunotherapeuticconsortiumdatabase AT overtonjamesa coronavirusimmunotherapeuticconsortiumdatabase AT vitarandi coronavirusimmunotherapeuticconsortiumdatabase AT guzmanorozcohector coronavirusimmunotherapeuticconsortiumdatabase AT mendesmarcus coronavirusimmunotherapeuticconsortiumdatabase AT kojimamari coronavirusimmunotherapeuticconsortiumdatabase AT halfmannpeterj coronavirusimmunotherapeuticconsortiumdatabase AT kawaokayoshihiro coronavirusimmunotherapeuticconsortiumdatabase AT altergalit coronavirusimmunotherapeuticconsortiumdatabase AT gagnonluc coronavirusimmunotherapeuticconsortiumdatabase AT baricralphs coronavirusimmunotherapeuticconsortiumdatabase AT tomarasgeorgiad coronavirusimmunotherapeuticconsortiumdatabase AT germanntim coronavirusimmunotherapeuticconsortiumdatabase AT bedingerdaniel coronavirusimmunotherapeuticconsortiumdatabase AT greenbaumjasona coronavirusimmunotherapeuticconsortiumdatabase AT saphireericaollmann coronavirusimmunotherapeuticconsortiumdatabase AT petersbjoern coronavirusimmunotherapeuticconsortiumdatabase |