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Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT
SIMPLE SUMMARY: This study investigates the impact of aggregation methods used for the generation of texture features on their robustness of nasopharyngeal carcinoma (NPC) based on (18)F-FDG PET/CT images. 128 NPC patients were enrolled and 95 texture features were extracted for each patient includi...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9913076/ https://www.ncbi.nlm.nih.gov/pubmed/36765889 http://dx.doi.org/10.3390/cancers15030932 |
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author | Peng, Lihong Xu, Hui Lv, Wenbing Lu, Lijun Chen, Wufan |
author_facet | Peng, Lihong Xu, Hui Lv, Wenbing Lu, Lijun Chen, Wufan |
author_sort | Peng, Lihong |
collection | PubMed |
description | SIMPLE SUMMARY: This study investigates the impact of aggregation methods used for the generation of texture features on their robustness of nasopharyngeal carcinoma (NPC) based on (18)F-FDG PET/CT images. 128 NPC patients were enrolled and 95 texture features were extracted for each patient including six feature families under different aggregation methods. For GLCM and GLRLM features, six aggregation methods were considered. For GLSZM, GLDZM, NGTDM and NGLDM features, three aggregation methods were considered. The robustness of the feature was assessed by the intra-class correlation coefficient (ICC). Different dimensional features with same aggregation methods showed worse robustness compared with the same dimensional features with different aggregation methods. Different discretization levels and PVC algorithms have a negligible effect on the percent of ICC categories of all texture features. ABSTRACT: Purpose: This study aims to investigate the impact of aggregation methods used for the generation of texture features on their robustness of nasopharyngeal carcinoma (NPC) based on (18)F-FDG PET/CT images. Methods: 128 NPC patients were enrolled and 95 texture features were extracted for each patient including six feature families under different aggregation methods. For GLCM and GLRLM features, six aggregation methods were considered. For GLSZM, GLDZM, NGTDM and NGLDM features, three aggregation methods were considered. The robustness of the features affected by aggregation methods was assessed by the pair-wise intra-class correlation coefficient (ICC). Furthermore, the effects of discretization and partial volume correction (PVC) on the percent of ICC categories of all texture features were evaluated by overall ICC instead of the pair-wise ICC. Results: There were 12 features with excellent pair-wise ICCs varying aggregation methods, namely joint average, sum average, autocorrelation, long run emphasis, high grey level run emphasis, short run high grey level emphasis, long run high grey level emphasis, run length variance, SZM high grey level emphasis, DZM high grey level emphasis, high grey level count emphasis and dependence count percentage. For GLCM and GLRLM features, 19/25 and 14/16 features showed excellent pair-wise ICCs varying aggregation methods (averaged and merged) on the same dimensional features (2D, 2.5D or 3D). Different discretization levels and partial volume corrections lead to consistent robustness of textural features affected by aggregation methods. Conclusion: Different dimensional features with the same aggregation methods showed worse robustness compared with the same dimensional features with different aggregation methods. Different discretization levels and PVC algorithms had a negligible effect on the percent of ICC categories of all texture features. |
format | Online Article Text |
id | pubmed-9913076 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-99130762023-02-11 Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT Peng, Lihong Xu, Hui Lv, Wenbing Lu, Lijun Chen, Wufan Cancers (Basel) Article SIMPLE SUMMARY: This study investigates the impact of aggregation methods used for the generation of texture features on their robustness of nasopharyngeal carcinoma (NPC) based on (18)F-FDG PET/CT images. 128 NPC patients were enrolled and 95 texture features were extracted for each patient including six feature families under different aggregation methods. For GLCM and GLRLM features, six aggregation methods were considered. For GLSZM, GLDZM, NGTDM and NGLDM features, three aggregation methods were considered. The robustness of the feature was assessed by the intra-class correlation coefficient (ICC). Different dimensional features with same aggregation methods showed worse robustness compared with the same dimensional features with different aggregation methods. Different discretization levels and PVC algorithms have a negligible effect on the percent of ICC categories of all texture features. ABSTRACT: Purpose: This study aims to investigate the impact of aggregation methods used for the generation of texture features on their robustness of nasopharyngeal carcinoma (NPC) based on (18)F-FDG PET/CT images. Methods: 128 NPC patients were enrolled and 95 texture features were extracted for each patient including six feature families under different aggregation methods. For GLCM and GLRLM features, six aggregation methods were considered. For GLSZM, GLDZM, NGTDM and NGLDM features, three aggregation methods were considered. The robustness of the features affected by aggregation methods was assessed by the pair-wise intra-class correlation coefficient (ICC). Furthermore, the effects of discretization and partial volume correction (PVC) on the percent of ICC categories of all texture features were evaluated by overall ICC instead of the pair-wise ICC. Results: There were 12 features with excellent pair-wise ICCs varying aggregation methods, namely joint average, sum average, autocorrelation, long run emphasis, high grey level run emphasis, short run high grey level emphasis, long run high grey level emphasis, run length variance, SZM high grey level emphasis, DZM high grey level emphasis, high grey level count emphasis and dependence count percentage. For GLCM and GLRLM features, 19/25 and 14/16 features showed excellent pair-wise ICCs varying aggregation methods (averaged and merged) on the same dimensional features (2D, 2.5D or 3D). Different discretization levels and partial volume corrections lead to consistent robustness of textural features affected by aggregation methods. Conclusion: Different dimensional features with the same aggregation methods showed worse robustness compared with the same dimensional features with different aggregation methods. Different discretization levels and PVC algorithms had a negligible effect on the percent of ICC categories of all texture features. MDPI 2023-02-01 /pmc/articles/PMC9913076/ /pubmed/36765889 http://dx.doi.org/10.3390/cancers15030932 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Peng, Lihong Xu, Hui Lv, Wenbing Lu, Lijun Chen, Wufan Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT |
title | Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT |
title_full | Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT |
title_fullStr | Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT |
title_full_unstemmed | Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT |
title_short | Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT |
title_sort | impact of aggregation methods for texture features on their robustness performance: application to nasopharyngeal (18)f-fdg pet/ct |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9913076/ https://www.ncbi.nlm.nih.gov/pubmed/36765889 http://dx.doi.org/10.3390/cancers15030932 |
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