Cargando…

Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT

SIMPLE SUMMARY: This study investigates the impact of aggregation methods used for the generation of texture features on their robustness of nasopharyngeal carcinoma (NPC) based on (18)F-FDG PET/CT images. 128 NPC patients were enrolled and 95 texture features were extracted for each patient includi...

Descripción completa

Detalles Bibliográficos
Autores principales: Peng, Lihong, Xu, Hui, Lv, Wenbing, Lu, Lijun, Chen, Wufan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9913076/
https://www.ncbi.nlm.nih.gov/pubmed/36765889
http://dx.doi.org/10.3390/cancers15030932
_version_ 1784885337829408768
author Peng, Lihong
Xu, Hui
Lv, Wenbing
Lu, Lijun
Chen, Wufan
author_facet Peng, Lihong
Xu, Hui
Lv, Wenbing
Lu, Lijun
Chen, Wufan
author_sort Peng, Lihong
collection PubMed
description SIMPLE SUMMARY: This study investigates the impact of aggregation methods used for the generation of texture features on their robustness of nasopharyngeal carcinoma (NPC) based on (18)F-FDG PET/CT images. 128 NPC patients were enrolled and 95 texture features were extracted for each patient including six feature families under different aggregation methods. For GLCM and GLRLM features, six aggregation methods were considered. For GLSZM, GLDZM, NGTDM and NGLDM features, three aggregation methods were considered. The robustness of the feature was assessed by the intra-class correlation coefficient (ICC). Different dimensional features with same aggregation methods showed worse robustness compared with the same dimensional features with different aggregation methods. Different discretization levels and PVC algorithms have a negligible effect on the percent of ICC categories of all texture features. ABSTRACT: Purpose: This study aims to investigate the impact of aggregation methods used for the generation of texture features on their robustness of nasopharyngeal carcinoma (NPC) based on (18)F-FDG PET/CT images. Methods: 128 NPC patients were enrolled and 95 texture features were extracted for each patient including six feature families under different aggregation methods. For GLCM and GLRLM features, six aggregation methods were considered. For GLSZM, GLDZM, NGTDM and NGLDM features, three aggregation methods were considered. The robustness of the features affected by aggregation methods was assessed by the pair-wise intra-class correlation coefficient (ICC). Furthermore, the effects of discretization and partial volume correction (PVC) on the percent of ICC categories of all texture features were evaluated by overall ICC instead of the pair-wise ICC. Results: There were 12 features with excellent pair-wise ICCs varying aggregation methods, namely joint average, sum average, autocorrelation, long run emphasis, high grey level run emphasis, short run high grey level emphasis, long run high grey level emphasis, run length variance, SZM high grey level emphasis, DZM high grey level emphasis, high grey level count emphasis and dependence count percentage. For GLCM and GLRLM features, 19/25 and 14/16 features showed excellent pair-wise ICCs varying aggregation methods (averaged and merged) on the same dimensional features (2D, 2.5D or 3D). Different discretization levels and partial volume corrections lead to consistent robustness of textural features affected by aggregation methods. Conclusion: Different dimensional features with the same aggregation methods showed worse robustness compared with the same dimensional features with different aggregation methods. Different discretization levels and PVC algorithms had a negligible effect on the percent of ICC categories of all texture features.
format Online
Article
Text
id pubmed-9913076
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-99130762023-02-11 Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT Peng, Lihong Xu, Hui Lv, Wenbing Lu, Lijun Chen, Wufan Cancers (Basel) Article SIMPLE SUMMARY: This study investigates the impact of aggregation methods used for the generation of texture features on their robustness of nasopharyngeal carcinoma (NPC) based on (18)F-FDG PET/CT images. 128 NPC patients were enrolled and 95 texture features were extracted for each patient including six feature families under different aggregation methods. For GLCM and GLRLM features, six aggregation methods were considered. For GLSZM, GLDZM, NGTDM and NGLDM features, three aggregation methods were considered. The robustness of the feature was assessed by the intra-class correlation coefficient (ICC). Different dimensional features with same aggregation methods showed worse robustness compared with the same dimensional features with different aggregation methods. Different discretization levels and PVC algorithms have a negligible effect on the percent of ICC categories of all texture features. ABSTRACT: Purpose: This study aims to investigate the impact of aggregation methods used for the generation of texture features on their robustness of nasopharyngeal carcinoma (NPC) based on (18)F-FDG PET/CT images. Methods: 128 NPC patients were enrolled and 95 texture features were extracted for each patient including six feature families under different aggregation methods. For GLCM and GLRLM features, six aggregation methods were considered. For GLSZM, GLDZM, NGTDM and NGLDM features, three aggregation methods were considered. The robustness of the features affected by aggregation methods was assessed by the pair-wise intra-class correlation coefficient (ICC). Furthermore, the effects of discretization and partial volume correction (PVC) on the percent of ICC categories of all texture features were evaluated by overall ICC instead of the pair-wise ICC. Results: There were 12 features with excellent pair-wise ICCs varying aggregation methods, namely joint average, sum average, autocorrelation, long run emphasis, high grey level run emphasis, short run high grey level emphasis, long run high grey level emphasis, run length variance, SZM high grey level emphasis, DZM high grey level emphasis, high grey level count emphasis and dependence count percentage. For GLCM and GLRLM features, 19/25 and 14/16 features showed excellent pair-wise ICCs varying aggregation methods (averaged and merged) on the same dimensional features (2D, 2.5D or 3D). Different discretization levels and partial volume corrections lead to consistent robustness of textural features affected by aggregation methods. Conclusion: Different dimensional features with the same aggregation methods showed worse robustness compared with the same dimensional features with different aggregation methods. Different discretization levels and PVC algorithms had a negligible effect on the percent of ICC categories of all texture features. MDPI 2023-02-01 /pmc/articles/PMC9913076/ /pubmed/36765889 http://dx.doi.org/10.3390/cancers15030932 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Peng, Lihong
Xu, Hui
Lv, Wenbing
Lu, Lijun
Chen, Wufan
Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT
title Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT
title_full Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT
title_fullStr Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT
title_full_unstemmed Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT
title_short Impact of Aggregation Methods for Texture Features on Their Robustness Performance: Application to Nasopharyngeal (18)F-FDG PET/CT
title_sort impact of aggregation methods for texture features on their robustness performance: application to nasopharyngeal (18)f-fdg pet/ct
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9913076/
https://www.ncbi.nlm.nih.gov/pubmed/36765889
http://dx.doi.org/10.3390/cancers15030932
work_keys_str_mv AT penglihong impactofaggregationmethodsfortexturefeaturesontheirrobustnessperformanceapplicationtonasopharyngeal18ffdgpetct
AT xuhui impactofaggregationmethodsfortexturefeaturesontheirrobustnessperformanceapplicationtonasopharyngeal18ffdgpetct
AT lvwenbing impactofaggregationmethodsfortexturefeaturesontheirrobustnessperformanceapplicationtonasopharyngeal18ffdgpetct
AT lulijun impactofaggregationmethodsfortexturefeaturesontheirrobustnessperformanceapplicationtonasopharyngeal18ffdgpetct
AT chenwufan impactofaggregationmethodsfortexturefeaturesontheirrobustnessperformanceapplicationtonasopharyngeal18ffdgpetct