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Candidate Genes and Pathways in Cervical Cancer: A Systematic Review and Integrated Bioinformatic Analysis
SIMPLE SUMMARY: Cervical cancer is the fourth most common cancer among women worldwide. Although many recommendations on the screening, diagnosis, and treatment of cervical cancer have been established, no comprehensive molecular mechanism for cervical cancer has been determined. Hence, this systema...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9913780/ https://www.ncbi.nlm.nih.gov/pubmed/36765810 http://dx.doi.org/10.3390/cancers15030853 |
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author | Elias, Marjanu Hikmah Das, Srijit Abdul Hamid, Nazefah |
author_facet | Elias, Marjanu Hikmah Das, Srijit Abdul Hamid, Nazefah |
author_sort | Elias, Marjanu Hikmah |
collection | PubMed |
description | SIMPLE SUMMARY: Cervical cancer is the fourth most common cancer among women worldwide. Although many recommendations on the screening, diagnosis, and treatment of cervical cancer have been established, no comprehensive molecular mechanism for cervical cancer has been determined. Hence, this systematic review and integrated bioinformatic analysis provides new insight into the key genes and pathways involved in the pathogenesis of cervical cancer and, thus, can be beneficial for developing better screening and treatment strategies for cervical cancer. ABSTRACT: Cervical cancer is the leading cause of cancer-related death among women in developing countries. However, no comprehensive molecular mechanism for cervical cancer has been established, as many studies were small-cohort studies conducted with small sample sizes. A thorough literature search was performed using the PubMed, Scopus, EBSCOhost, and Science Direct databases. Medical Subject Heading (MeSH) terms such as “Uterine Cervical Neoplasms” and “gene expression” were used as the keywords in all fields. A total of 4027 studies were retrieved, and only clinical studies, which used the microarray method to identify differentially expressed genes (DEGs) in the cervical tissue of cervical cancer patients, were selected. Following the screening, 6 studies were selected and 1128 DEGs were extracted from the data. Sixty-two differentially expressed genes from at least two studies were selected for further analysis by DAVID, STRING, and Cytoscape software. In cervical cancer pathogenesis, three significant clusters with high intermolecular interactions from the Protein–Protein Interaction (PPI) network complex revealed three major molecular mechanisms, including cell signaling, cell cycle, and cell differentiation. Subsequently, eight genes were chosen as the candidate genes based on their involvement in the relevant gene ontology (GO) and their interaction with other genes in the PPI network through undirected first neighbor nodes. The present systematic review improves our understanding of the molecular mechanism of cervical cancer and the proposed genes that can be used to expand the biomarker panel in the screening for cervical cancer. The targeted genes may be beneficial for the development of better treatment strategies. |
format | Online Article Text |
id | pubmed-9913780 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-99137802023-02-11 Candidate Genes and Pathways in Cervical Cancer: A Systematic Review and Integrated Bioinformatic Analysis Elias, Marjanu Hikmah Das, Srijit Abdul Hamid, Nazefah Cancers (Basel) Systematic Review SIMPLE SUMMARY: Cervical cancer is the fourth most common cancer among women worldwide. Although many recommendations on the screening, diagnosis, and treatment of cervical cancer have been established, no comprehensive molecular mechanism for cervical cancer has been determined. Hence, this systematic review and integrated bioinformatic analysis provides new insight into the key genes and pathways involved in the pathogenesis of cervical cancer and, thus, can be beneficial for developing better screening and treatment strategies for cervical cancer. ABSTRACT: Cervical cancer is the leading cause of cancer-related death among women in developing countries. However, no comprehensive molecular mechanism for cervical cancer has been established, as many studies were small-cohort studies conducted with small sample sizes. A thorough literature search was performed using the PubMed, Scopus, EBSCOhost, and Science Direct databases. Medical Subject Heading (MeSH) terms such as “Uterine Cervical Neoplasms” and “gene expression” were used as the keywords in all fields. A total of 4027 studies were retrieved, and only clinical studies, which used the microarray method to identify differentially expressed genes (DEGs) in the cervical tissue of cervical cancer patients, were selected. Following the screening, 6 studies were selected and 1128 DEGs were extracted from the data. Sixty-two differentially expressed genes from at least two studies were selected for further analysis by DAVID, STRING, and Cytoscape software. In cervical cancer pathogenesis, three significant clusters with high intermolecular interactions from the Protein–Protein Interaction (PPI) network complex revealed three major molecular mechanisms, including cell signaling, cell cycle, and cell differentiation. Subsequently, eight genes were chosen as the candidate genes based on their involvement in the relevant gene ontology (GO) and their interaction with other genes in the PPI network through undirected first neighbor nodes. The present systematic review improves our understanding of the molecular mechanism of cervical cancer and the proposed genes that can be used to expand the biomarker panel in the screening for cervical cancer. The targeted genes may be beneficial for the development of better treatment strategies. MDPI 2023-01-30 /pmc/articles/PMC9913780/ /pubmed/36765810 http://dx.doi.org/10.3390/cancers15030853 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Systematic Review Elias, Marjanu Hikmah Das, Srijit Abdul Hamid, Nazefah Candidate Genes and Pathways in Cervical Cancer: A Systematic Review and Integrated Bioinformatic Analysis |
title | Candidate Genes and Pathways in Cervical Cancer: A Systematic Review and Integrated Bioinformatic Analysis |
title_full | Candidate Genes and Pathways in Cervical Cancer: A Systematic Review and Integrated Bioinformatic Analysis |
title_fullStr | Candidate Genes and Pathways in Cervical Cancer: A Systematic Review and Integrated Bioinformatic Analysis |
title_full_unstemmed | Candidate Genes and Pathways in Cervical Cancer: A Systematic Review and Integrated Bioinformatic Analysis |
title_short | Candidate Genes and Pathways in Cervical Cancer: A Systematic Review and Integrated Bioinformatic Analysis |
title_sort | candidate genes and pathways in cervical cancer: a systematic review and integrated bioinformatic analysis |
topic | Systematic Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9913780/ https://www.ncbi.nlm.nih.gov/pubmed/36765810 http://dx.doi.org/10.3390/cancers15030853 |
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