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Targeted Sequencing Approach and Its Clinical Applications for the Molecular Diagnosis of Human Diseases

The outbreak of COVID-19 has positively impacted the NGS market recently. Targeted sequencing (TS) has become an important routine technique in both clinical and research settings, with advantages including high confidence and accuracy, a reasonable turnaround time, relatively low cost, and fewer da...

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Autores principales: Pei, Xiao Meng, Yeung, Martin Ho Yin, Wong, Alex Ngai Nick, Tsang, Hin Fung, Yu, Allen Chi Shing, Yim, Aldrin Kay Yuen, Wong, Sze Chuen Cesar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9913990/
https://www.ncbi.nlm.nih.gov/pubmed/36766834
http://dx.doi.org/10.3390/cells12030493
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author Pei, Xiao Meng
Yeung, Martin Ho Yin
Wong, Alex Ngai Nick
Tsang, Hin Fung
Yu, Allen Chi Shing
Yim, Aldrin Kay Yuen
Wong, Sze Chuen Cesar
author_facet Pei, Xiao Meng
Yeung, Martin Ho Yin
Wong, Alex Ngai Nick
Tsang, Hin Fung
Yu, Allen Chi Shing
Yim, Aldrin Kay Yuen
Wong, Sze Chuen Cesar
author_sort Pei, Xiao Meng
collection PubMed
description The outbreak of COVID-19 has positively impacted the NGS market recently. Targeted sequencing (TS) has become an important routine technique in both clinical and research settings, with advantages including high confidence and accuracy, a reasonable turnaround time, relatively low cost, and fewer data burdens with the level of bioinformatics or computational demand. Since there are no clear consensus guidelines on the wide range of next-generation sequencing (NGS) platforms and techniques, there is a vital need for researchers and clinicians to develop efficient approaches, especially for the molecular diagnosis of diseases in the emergency of the disease and the global pandemic outbreak of COVID-19. In this review, we aim to summarize different methods of TS, demonstrate parameters for TS assay designs, illustrate different TS panels, discuss their limitations, and present the challenges of TS concerning their clinical application for the molecular diagnosis of human diseases.
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spelling pubmed-99139902023-02-11 Targeted Sequencing Approach and Its Clinical Applications for the Molecular Diagnosis of Human Diseases Pei, Xiao Meng Yeung, Martin Ho Yin Wong, Alex Ngai Nick Tsang, Hin Fung Yu, Allen Chi Shing Yim, Aldrin Kay Yuen Wong, Sze Chuen Cesar Cells Review The outbreak of COVID-19 has positively impacted the NGS market recently. Targeted sequencing (TS) has become an important routine technique in both clinical and research settings, with advantages including high confidence and accuracy, a reasonable turnaround time, relatively low cost, and fewer data burdens with the level of bioinformatics or computational demand. Since there are no clear consensus guidelines on the wide range of next-generation sequencing (NGS) platforms and techniques, there is a vital need for researchers and clinicians to develop efficient approaches, especially for the molecular diagnosis of diseases in the emergency of the disease and the global pandemic outbreak of COVID-19. In this review, we aim to summarize different methods of TS, demonstrate parameters for TS assay designs, illustrate different TS panels, discuss their limitations, and present the challenges of TS concerning their clinical application for the molecular diagnosis of human diseases. MDPI 2023-02-02 /pmc/articles/PMC9913990/ /pubmed/36766834 http://dx.doi.org/10.3390/cells12030493 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Pei, Xiao Meng
Yeung, Martin Ho Yin
Wong, Alex Ngai Nick
Tsang, Hin Fung
Yu, Allen Chi Shing
Yim, Aldrin Kay Yuen
Wong, Sze Chuen Cesar
Targeted Sequencing Approach and Its Clinical Applications for the Molecular Diagnosis of Human Diseases
title Targeted Sequencing Approach and Its Clinical Applications for the Molecular Diagnosis of Human Diseases
title_full Targeted Sequencing Approach and Its Clinical Applications for the Molecular Diagnosis of Human Diseases
title_fullStr Targeted Sequencing Approach and Its Clinical Applications for the Molecular Diagnosis of Human Diseases
title_full_unstemmed Targeted Sequencing Approach and Its Clinical Applications for the Molecular Diagnosis of Human Diseases
title_short Targeted Sequencing Approach and Its Clinical Applications for the Molecular Diagnosis of Human Diseases
title_sort targeted sequencing approach and its clinical applications for the molecular diagnosis of human diseases
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9913990/
https://www.ncbi.nlm.nih.gov/pubmed/36766834
http://dx.doi.org/10.3390/cells12030493
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