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WILMS TUMOR MUTATIONAL SUBCLASSES CONVERGE TO DRIVE CCND2 OVEREXPRESSION

Wilms tumor, the most common kidney cancer in pediatrics, arises from embryonic renal progenitors. Although many patients are cured with multimodal therapy, outcomes remain poor for those with high-risk features. Recent sequencing efforts have provided few biological or clinically actionable insight...

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Autores principales: Xu, Lin, Desai, Kavita, Kim, Jiwoong, Zhou, Qinbo, Guo, Lei, Xiao, Xue, Zhang, Yanfeng, Zhou, Li, Yuksel, Aysen, Catchpoole, Daniel R., Amatruda, James F., Chen, Kenneth S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9915828/
https://www.ncbi.nlm.nih.gov/pubmed/36778325
http://dx.doi.org/10.1101/2023.01.30.23285117
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author Xu, Lin
Desai, Kavita
Kim, Jiwoong
Zhou, Qinbo
Guo, Lei
Xiao, Xue
Zhang, Yanfeng
Zhou, Li
Yuksel, Aysen
Catchpoole, Daniel R.
Amatruda, James F.
Chen, Kenneth S.
author_facet Xu, Lin
Desai, Kavita
Kim, Jiwoong
Zhou, Qinbo
Guo, Lei
Xiao, Xue
Zhang, Yanfeng
Zhou, Li
Yuksel, Aysen
Catchpoole, Daniel R.
Amatruda, James F.
Chen, Kenneth S.
author_sort Xu, Lin
collection PubMed
description Wilms tumor, the most common kidney cancer in pediatrics, arises from embryonic renal progenitors. Although many patients are cured with multimodal therapy, outcomes remain poor for those with high-risk features. Recent sequencing efforts have provided few biological or clinically actionable insights. Here, we performed DNA and RNA sequencing on 94 Wilms tumors to understand how Wilms tumor mutations transform the transcriptome to arrest differentiation and drive proliferation. We show that most Wilms tumor mutations fall into four classes, each with unique transcriptional signatures: microRNA processing, MYCN activation, chromatin remodeling, and kidney development. In particular, the microRNA processing enzyme DROSHA is one of the most commonly mutated genes in Wilms tumor. We show that DROSHA mutations impair pri-microRNA cleavage, de-repress microRNA target genes, halt differentiation, and overexpress cyclin D2 (CCND2). Several mutational classes converge to drive CCND2 overexpression, which could render them susceptible to cell-cycle inhibitors.
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spelling pubmed-99158282023-02-11 WILMS TUMOR MUTATIONAL SUBCLASSES CONVERGE TO DRIVE CCND2 OVEREXPRESSION Xu, Lin Desai, Kavita Kim, Jiwoong Zhou, Qinbo Guo, Lei Xiao, Xue Zhang, Yanfeng Zhou, Li Yuksel, Aysen Catchpoole, Daniel R. Amatruda, James F. Chen, Kenneth S. medRxiv Article Wilms tumor, the most common kidney cancer in pediatrics, arises from embryonic renal progenitors. Although many patients are cured with multimodal therapy, outcomes remain poor for those with high-risk features. Recent sequencing efforts have provided few biological or clinically actionable insights. Here, we performed DNA and RNA sequencing on 94 Wilms tumors to understand how Wilms tumor mutations transform the transcriptome to arrest differentiation and drive proliferation. We show that most Wilms tumor mutations fall into four classes, each with unique transcriptional signatures: microRNA processing, MYCN activation, chromatin remodeling, and kidney development. In particular, the microRNA processing enzyme DROSHA is one of the most commonly mutated genes in Wilms tumor. We show that DROSHA mutations impair pri-microRNA cleavage, de-repress microRNA target genes, halt differentiation, and overexpress cyclin D2 (CCND2). Several mutational classes converge to drive CCND2 overexpression, which could render them susceptible to cell-cycle inhibitors. Cold Spring Harbor Laboratory 2023-02-02 /pmc/articles/PMC9915828/ /pubmed/36778325 http://dx.doi.org/10.1101/2023.01.30.23285117 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Xu, Lin
Desai, Kavita
Kim, Jiwoong
Zhou, Qinbo
Guo, Lei
Xiao, Xue
Zhang, Yanfeng
Zhou, Li
Yuksel, Aysen
Catchpoole, Daniel R.
Amatruda, James F.
Chen, Kenneth S.
WILMS TUMOR MUTATIONAL SUBCLASSES CONVERGE TO DRIVE CCND2 OVEREXPRESSION
title WILMS TUMOR MUTATIONAL SUBCLASSES CONVERGE TO DRIVE CCND2 OVEREXPRESSION
title_full WILMS TUMOR MUTATIONAL SUBCLASSES CONVERGE TO DRIVE CCND2 OVEREXPRESSION
title_fullStr WILMS TUMOR MUTATIONAL SUBCLASSES CONVERGE TO DRIVE CCND2 OVEREXPRESSION
title_full_unstemmed WILMS TUMOR MUTATIONAL SUBCLASSES CONVERGE TO DRIVE CCND2 OVEREXPRESSION
title_short WILMS TUMOR MUTATIONAL SUBCLASSES CONVERGE TO DRIVE CCND2 OVEREXPRESSION
title_sort wilms tumor mutational subclasses converge to drive ccnd2 overexpression
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9915828/
https://www.ncbi.nlm.nih.gov/pubmed/36778325
http://dx.doi.org/10.1101/2023.01.30.23285117
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