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Structural and Dynamic Disturbances Revealed by Molecular Dynamics Simulations Predict the Impact on Function of CCT5 Chaperonin Mutations Associated with Rare Severe Distal Neuropathies

Mutations in genes encoding molecular chaperones, for instance the genes encoding the subunits of the chaperonin CCT (chaperonin containing TCP-1, also known as TRiC), are associated with rare neurodegenerative disorders. Using a classical molecular dynamics approach, we investigated the occurrence...

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Autores principales: Scalia, Federica, Lo Bosco, Giosuè, Paladino, Letizia, Vitale, Alessandra Maria, Noori, Leila, Conway de Macario, Everly, Macario, Alberto J. L., Bucchieri, Fabio, Cappello, Francesco, Lo Celso, Fabrizio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9917133/
https://www.ncbi.nlm.nih.gov/pubmed/36768350
http://dx.doi.org/10.3390/ijms24032018
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author Scalia, Federica
Lo Bosco, Giosuè
Paladino, Letizia
Vitale, Alessandra Maria
Noori, Leila
Conway de Macario, Everly
Macario, Alberto J. L.
Bucchieri, Fabio
Cappello, Francesco
Lo Celso, Fabrizio
author_facet Scalia, Federica
Lo Bosco, Giosuè
Paladino, Letizia
Vitale, Alessandra Maria
Noori, Leila
Conway de Macario, Everly
Macario, Alberto J. L.
Bucchieri, Fabio
Cappello, Francesco
Lo Celso, Fabrizio
author_sort Scalia, Federica
collection PubMed
description Mutations in genes encoding molecular chaperones, for instance the genes encoding the subunits of the chaperonin CCT (chaperonin containing TCP-1, also known as TRiC), are associated with rare neurodegenerative disorders. Using a classical molecular dynamics approach, we investigated the occurrence of conformational changes and differences in physicochemical properties of the CCT5 mutations His147Arg and Leu224Val associated with a sensory and a motor distal neuropathy, respectively. The apical domain of both variants was substantially but differently affected by the mutations, although these were in other domains. The distribution of hydrogen bonds and electrostatic potentials on the surface of the mutant subunits differed from the wild-type molecule. Structural and dynamic analyses, together with our previous experimental data, suggest that genetic mutations may cause different changes in the protein-binding capacity of CCT5 variants, presumably within both hetero- and/or homo-oligomeric complexes. Further investigations are necessary to elucidate the molecular pathogenic pathways of the two variants that produce the two distinct phenotypes. The data and clinical observations by us and others indicate that CCT chaperonopathies are more frequent than currently believed and should be investigated in patients with neuropathies.
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spelling pubmed-99171332023-02-11 Structural and Dynamic Disturbances Revealed by Molecular Dynamics Simulations Predict the Impact on Function of CCT5 Chaperonin Mutations Associated with Rare Severe Distal Neuropathies Scalia, Federica Lo Bosco, Giosuè Paladino, Letizia Vitale, Alessandra Maria Noori, Leila Conway de Macario, Everly Macario, Alberto J. L. Bucchieri, Fabio Cappello, Francesco Lo Celso, Fabrizio Int J Mol Sci Article Mutations in genes encoding molecular chaperones, for instance the genes encoding the subunits of the chaperonin CCT (chaperonin containing TCP-1, also known as TRiC), are associated with rare neurodegenerative disorders. Using a classical molecular dynamics approach, we investigated the occurrence of conformational changes and differences in physicochemical properties of the CCT5 mutations His147Arg and Leu224Val associated with a sensory and a motor distal neuropathy, respectively. The apical domain of both variants was substantially but differently affected by the mutations, although these were in other domains. The distribution of hydrogen bonds and electrostatic potentials on the surface of the mutant subunits differed from the wild-type molecule. Structural and dynamic analyses, together with our previous experimental data, suggest that genetic mutations may cause different changes in the protein-binding capacity of CCT5 variants, presumably within both hetero- and/or homo-oligomeric complexes. Further investigations are necessary to elucidate the molecular pathogenic pathways of the two variants that produce the two distinct phenotypes. The data and clinical observations by us and others indicate that CCT chaperonopathies are more frequent than currently believed and should be investigated in patients with neuropathies. MDPI 2023-01-19 /pmc/articles/PMC9917133/ /pubmed/36768350 http://dx.doi.org/10.3390/ijms24032018 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Scalia, Federica
Lo Bosco, Giosuè
Paladino, Letizia
Vitale, Alessandra Maria
Noori, Leila
Conway de Macario, Everly
Macario, Alberto J. L.
Bucchieri, Fabio
Cappello, Francesco
Lo Celso, Fabrizio
Structural and Dynamic Disturbances Revealed by Molecular Dynamics Simulations Predict the Impact on Function of CCT5 Chaperonin Mutations Associated with Rare Severe Distal Neuropathies
title Structural and Dynamic Disturbances Revealed by Molecular Dynamics Simulations Predict the Impact on Function of CCT5 Chaperonin Mutations Associated with Rare Severe Distal Neuropathies
title_full Structural and Dynamic Disturbances Revealed by Molecular Dynamics Simulations Predict the Impact on Function of CCT5 Chaperonin Mutations Associated with Rare Severe Distal Neuropathies
title_fullStr Structural and Dynamic Disturbances Revealed by Molecular Dynamics Simulations Predict the Impact on Function of CCT5 Chaperonin Mutations Associated with Rare Severe Distal Neuropathies
title_full_unstemmed Structural and Dynamic Disturbances Revealed by Molecular Dynamics Simulations Predict the Impact on Function of CCT5 Chaperonin Mutations Associated with Rare Severe Distal Neuropathies
title_short Structural and Dynamic Disturbances Revealed by Molecular Dynamics Simulations Predict the Impact on Function of CCT5 Chaperonin Mutations Associated with Rare Severe Distal Neuropathies
title_sort structural and dynamic disturbances revealed by molecular dynamics simulations predict the impact on function of cct5 chaperonin mutations associated with rare severe distal neuropathies
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9917133/
https://www.ncbi.nlm.nih.gov/pubmed/36768350
http://dx.doi.org/10.3390/ijms24032018
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