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4-Methylumbelliferone Targets Revealed by Public Data Analysis and Liver Transcriptome Sequencing

4-methylumbelliferone (4MU) is a well-known hyaluronic acid synthesis inhibitor and an approved drug for the treatment of cholestasis. In animal models, 4MU decreases inflammation, reduces fibrosis, and lowers body weight, serum cholesterol, and insulin resistance. It also inhibits tumor progression...

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Autores principales: Tsitrina, Alexandra A., Halimani, Noreen, Andreichenko, Irina N., Sabirov, Marat, Nesterchuk, Mikhail, Dashenkova, Nataliya O., Romanov, Roman, Bulgakova, Elena V., Mikaelyan, Arsen, Kotelevtsev, Yuri
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9917189/
https://www.ncbi.nlm.nih.gov/pubmed/36768453
http://dx.doi.org/10.3390/ijms24032129
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author Tsitrina, Alexandra A.
Halimani, Noreen
Andreichenko, Irina N.
Sabirov, Marat
Nesterchuk, Mikhail
Dashenkova, Nataliya O.
Romanov, Roman
Bulgakova, Elena V.
Mikaelyan, Arsen
Kotelevtsev, Yuri
author_facet Tsitrina, Alexandra A.
Halimani, Noreen
Andreichenko, Irina N.
Sabirov, Marat
Nesterchuk, Mikhail
Dashenkova, Nataliya O.
Romanov, Roman
Bulgakova, Elena V.
Mikaelyan, Arsen
Kotelevtsev, Yuri
author_sort Tsitrina, Alexandra A.
collection PubMed
description 4-methylumbelliferone (4MU) is a well-known hyaluronic acid synthesis inhibitor and an approved drug for the treatment of cholestasis. In animal models, 4MU decreases inflammation, reduces fibrosis, and lowers body weight, serum cholesterol, and insulin resistance. It also inhibits tumor progression and metastasis. The broad spectrum of effects suggests multiple and yet unknown targets of 4MU. Aiming at 4MU target deconvolution, we have analyzed publicly available data bases, including: 1. Small molecule library Bio Assay screening (PubChemBioAssay); 2. GO pathway databases screening; 3. Protein Atlas Database. We also performed comparative liver transcriptome analysis of mice on normal diet and mice fed with 4MU for two weeks. Potential targets of 4MU public data base analysis fall into two big groups, enzymes and transcription factors (TFs), including 13 members of the nuclear receptor superfamily regulating lipid and carbohydrate metabolism. Transcriptome analysis revealed changes in the expression of genes involved in bile acid metabolism, gluconeogenesis, and immune response. It was found that 4MU feeding decreased the accumulation of the glycogen granules in the liver. Thus, 4MU has multiple targets and can regulate cell metabolism by modulating signaling via nuclear receptors.
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spelling pubmed-99171892023-02-11 4-Methylumbelliferone Targets Revealed by Public Data Analysis and Liver Transcriptome Sequencing Tsitrina, Alexandra A. Halimani, Noreen Andreichenko, Irina N. Sabirov, Marat Nesterchuk, Mikhail Dashenkova, Nataliya O. Romanov, Roman Bulgakova, Elena V. Mikaelyan, Arsen Kotelevtsev, Yuri Int J Mol Sci Article 4-methylumbelliferone (4MU) is a well-known hyaluronic acid synthesis inhibitor and an approved drug for the treatment of cholestasis. In animal models, 4MU decreases inflammation, reduces fibrosis, and lowers body weight, serum cholesterol, and insulin resistance. It also inhibits tumor progression and metastasis. The broad spectrum of effects suggests multiple and yet unknown targets of 4MU. Aiming at 4MU target deconvolution, we have analyzed publicly available data bases, including: 1. Small molecule library Bio Assay screening (PubChemBioAssay); 2. GO pathway databases screening; 3. Protein Atlas Database. We also performed comparative liver transcriptome analysis of mice on normal diet and mice fed with 4MU for two weeks. Potential targets of 4MU public data base analysis fall into two big groups, enzymes and transcription factors (TFs), including 13 members of the nuclear receptor superfamily regulating lipid and carbohydrate metabolism. Transcriptome analysis revealed changes in the expression of genes involved in bile acid metabolism, gluconeogenesis, and immune response. It was found that 4MU feeding decreased the accumulation of the glycogen granules in the liver. Thus, 4MU has multiple targets and can regulate cell metabolism by modulating signaling via nuclear receptors. MDPI 2023-01-21 /pmc/articles/PMC9917189/ /pubmed/36768453 http://dx.doi.org/10.3390/ijms24032129 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Tsitrina, Alexandra A.
Halimani, Noreen
Andreichenko, Irina N.
Sabirov, Marat
Nesterchuk, Mikhail
Dashenkova, Nataliya O.
Romanov, Roman
Bulgakova, Elena V.
Mikaelyan, Arsen
Kotelevtsev, Yuri
4-Methylumbelliferone Targets Revealed by Public Data Analysis and Liver Transcriptome Sequencing
title 4-Methylumbelliferone Targets Revealed by Public Data Analysis and Liver Transcriptome Sequencing
title_full 4-Methylumbelliferone Targets Revealed by Public Data Analysis and Liver Transcriptome Sequencing
title_fullStr 4-Methylumbelliferone Targets Revealed by Public Data Analysis and Liver Transcriptome Sequencing
title_full_unstemmed 4-Methylumbelliferone Targets Revealed by Public Data Analysis and Liver Transcriptome Sequencing
title_short 4-Methylumbelliferone Targets Revealed by Public Data Analysis and Liver Transcriptome Sequencing
title_sort 4-methylumbelliferone targets revealed by public data analysis and liver transcriptome sequencing
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9917189/
https://www.ncbi.nlm.nih.gov/pubmed/36768453
http://dx.doi.org/10.3390/ijms24032129
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