Cargando…
Genomics, Proteomics, and Metabolomics Approaches to Improve Abiotic Stress Tolerance in Tomato Plant
To explore changes in proteins and metabolites under stress circumstances, genomics, proteomics, and metabolomics methods are used. In-depth research over the previous ten years has gradually revealed the fundamental processes of plants’ responses to environmental stress. Abiotic stresses, which inc...
Autores principales: | , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9918255/ https://www.ncbi.nlm.nih.gov/pubmed/36769343 http://dx.doi.org/10.3390/ijms24033025 |
_version_ | 1784886568562982912 |
---|---|
author | Naik, Bindu Kumar, Vijay Rizwanuddin, Sheikh Chauhan, Mansi Choudhary, Megha Gupta, Arun Kumar Kumar, Pankaj Kumar, Vivek Saris, Per Erik Joakim Rather, Muzamil Ahmad Bhuyan, Shuvam Neog, Panchi Rani Mishra, Sadhna Rustagi, Sarvesh |
author_facet | Naik, Bindu Kumar, Vijay Rizwanuddin, Sheikh Chauhan, Mansi Choudhary, Megha Gupta, Arun Kumar Kumar, Pankaj Kumar, Vivek Saris, Per Erik Joakim Rather, Muzamil Ahmad Bhuyan, Shuvam Neog, Panchi Rani Mishra, Sadhna Rustagi, Sarvesh |
author_sort | Naik, Bindu |
collection | PubMed |
description | To explore changes in proteins and metabolites under stress circumstances, genomics, proteomics, and metabolomics methods are used. In-depth research over the previous ten years has gradually revealed the fundamental processes of plants’ responses to environmental stress. Abiotic stresses, which include temperature extremes, water scarcity, and metal toxicity brought on by human activity and urbanization, are a major cause for concern, since they can result in unsustainable warming trends and drastically lower crop yields. Furthermore, there is an emerging reliance on agrochemicals. Stress is responsible for physiological transformations such as the formation of reactive oxygen, stomatal opening and closure, cytosolic calcium ion concentrations, metabolite profiles and their dynamic changes, expression of stress-responsive genes, activation of potassium channels, etc. Research regarding abiotic stresses is lacking because defense feedbacks to abiotic factors necessitate regulating the changes that activate multiple genes and pathways that are not properly explored. It is clear from the involvement of these genes that plant stress response and adaptation are complicated processes. Targeting the multigenicity of plant abiotic stress responses caused by genomic sequences, transcripts, protein organization and interactions, stress-specific and cellular transcriptome collections, and mutant screens can be the first step in an integrative approach. Therefore, in this review, we focused on the genomes, proteomics, and metabolomics of tomatoes under abiotic stress. |
format | Online Article Text |
id | pubmed-9918255 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-99182552023-02-11 Genomics, Proteomics, and Metabolomics Approaches to Improve Abiotic Stress Tolerance in Tomato Plant Naik, Bindu Kumar, Vijay Rizwanuddin, Sheikh Chauhan, Mansi Choudhary, Megha Gupta, Arun Kumar Kumar, Pankaj Kumar, Vivek Saris, Per Erik Joakim Rather, Muzamil Ahmad Bhuyan, Shuvam Neog, Panchi Rani Mishra, Sadhna Rustagi, Sarvesh Int J Mol Sci Review To explore changes in proteins and metabolites under stress circumstances, genomics, proteomics, and metabolomics methods are used. In-depth research over the previous ten years has gradually revealed the fundamental processes of plants’ responses to environmental stress. Abiotic stresses, which include temperature extremes, water scarcity, and metal toxicity brought on by human activity and urbanization, are a major cause for concern, since they can result in unsustainable warming trends and drastically lower crop yields. Furthermore, there is an emerging reliance on agrochemicals. Stress is responsible for physiological transformations such as the formation of reactive oxygen, stomatal opening and closure, cytosolic calcium ion concentrations, metabolite profiles and their dynamic changes, expression of stress-responsive genes, activation of potassium channels, etc. Research regarding abiotic stresses is lacking because defense feedbacks to abiotic factors necessitate regulating the changes that activate multiple genes and pathways that are not properly explored. It is clear from the involvement of these genes that plant stress response and adaptation are complicated processes. Targeting the multigenicity of plant abiotic stress responses caused by genomic sequences, transcripts, protein organization and interactions, stress-specific and cellular transcriptome collections, and mutant screens can be the first step in an integrative approach. Therefore, in this review, we focused on the genomes, proteomics, and metabolomics of tomatoes under abiotic stress. MDPI 2023-02-03 /pmc/articles/PMC9918255/ /pubmed/36769343 http://dx.doi.org/10.3390/ijms24033025 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Naik, Bindu Kumar, Vijay Rizwanuddin, Sheikh Chauhan, Mansi Choudhary, Megha Gupta, Arun Kumar Kumar, Pankaj Kumar, Vivek Saris, Per Erik Joakim Rather, Muzamil Ahmad Bhuyan, Shuvam Neog, Panchi Rani Mishra, Sadhna Rustagi, Sarvesh Genomics, Proteomics, and Metabolomics Approaches to Improve Abiotic Stress Tolerance in Tomato Plant |
title | Genomics, Proteomics, and Metabolomics Approaches to Improve Abiotic Stress Tolerance in Tomato Plant |
title_full | Genomics, Proteomics, and Metabolomics Approaches to Improve Abiotic Stress Tolerance in Tomato Plant |
title_fullStr | Genomics, Proteomics, and Metabolomics Approaches to Improve Abiotic Stress Tolerance in Tomato Plant |
title_full_unstemmed | Genomics, Proteomics, and Metabolomics Approaches to Improve Abiotic Stress Tolerance in Tomato Plant |
title_short | Genomics, Proteomics, and Metabolomics Approaches to Improve Abiotic Stress Tolerance in Tomato Plant |
title_sort | genomics, proteomics, and metabolomics approaches to improve abiotic stress tolerance in tomato plant |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9918255/ https://www.ncbi.nlm.nih.gov/pubmed/36769343 http://dx.doi.org/10.3390/ijms24033025 |
work_keys_str_mv | AT naikbindu genomicsproteomicsandmetabolomicsapproachestoimproveabioticstresstoleranceintomatoplant AT kumarvijay genomicsproteomicsandmetabolomicsapproachestoimproveabioticstresstoleranceintomatoplant AT rizwanuddinsheikh genomicsproteomicsandmetabolomicsapproachestoimproveabioticstresstoleranceintomatoplant AT chauhanmansi genomicsproteomicsandmetabolomicsapproachestoimproveabioticstresstoleranceintomatoplant AT choudharymegha genomicsproteomicsandmetabolomicsapproachestoimproveabioticstresstoleranceintomatoplant AT guptaarunkumar genomicsproteomicsandmetabolomicsapproachestoimproveabioticstresstoleranceintomatoplant AT kumarpankaj genomicsproteomicsandmetabolomicsapproachestoimproveabioticstresstoleranceintomatoplant AT kumarvivek genomicsproteomicsandmetabolomicsapproachestoimproveabioticstresstoleranceintomatoplant AT sarispererikjoakim genomicsproteomicsandmetabolomicsapproachestoimproveabioticstresstoleranceintomatoplant AT rathermuzamilahmad genomicsproteomicsandmetabolomicsapproachestoimproveabioticstresstoleranceintomatoplant AT bhuyanshuvam genomicsproteomicsandmetabolomicsapproachestoimproveabioticstresstoleranceintomatoplant AT neogpanchirani genomicsproteomicsandmetabolomicsapproachestoimproveabioticstresstoleranceintomatoplant AT mishrasadhna genomicsproteomicsandmetabolomicsapproachestoimproveabioticstresstoleranceintomatoplant AT rustagisarvesh genomicsproteomicsandmetabolomicsapproachestoimproveabioticstresstoleranceintomatoplant |