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Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework

Spiking neural networks are biologically inspired machine learning algorithms attracting researchers’ attention for their applicability to alternative energy-efficient hardware other than traditional computers. In the current work, spiking neural networks have been tested in a quantitative structure...

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Detalles Bibliográficos
Autores principales: Nascimben, Mauro, Rimondini, Lia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9919191/
https://www.ncbi.nlm.nih.gov/pubmed/36771009
http://dx.doi.org/10.3390/molecules28031342
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author Nascimben, Mauro
Rimondini, Lia
author_facet Nascimben, Mauro
Rimondini, Lia
author_sort Nascimben, Mauro
collection PubMed
description Spiking neural networks are biologically inspired machine learning algorithms attracting researchers’ attention for their applicability to alternative energy-efficient hardware other than traditional computers. In the current work, spiking neural networks have been tested in a quantitative structure–activity analysis targeting the toxicity of molecules. Multiple public-domain databases of compounds have been evaluated with spiking neural networks, achieving accuracies compatible with high-quality frameworks presented in the previous literature. The numerical experiments also included an analysis of hyperparameters and tested the spiking neural networks on molecular fingerprints of different lengths. Proposing alternatives to traditional software and hardware for time- and resource-consuming tasks, such as those found in chemoinformatics, may open the door to new research and improvements in the field.
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spelling pubmed-99191912023-02-12 Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework Nascimben, Mauro Rimondini, Lia Molecules Article Spiking neural networks are biologically inspired machine learning algorithms attracting researchers’ attention for their applicability to alternative energy-efficient hardware other than traditional computers. In the current work, spiking neural networks have been tested in a quantitative structure–activity analysis targeting the toxicity of molecules. Multiple public-domain databases of compounds have been evaluated with spiking neural networks, achieving accuracies compatible with high-quality frameworks presented in the previous literature. The numerical experiments also included an analysis of hyperparameters and tested the spiking neural networks on molecular fingerprints of different lengths. Proposing alternatives to traditional software and hardware for time- and resource-consuming tasks, such as those found in chemoinformatics, may open the door to new research and improvements in the field. MDPI 2023-01-31 /pmc/articles/PMC9919191/ /pubmed/36771009 http://dx.doi.org/10.3390/molecules28031342 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Nascimben, Mauro
Rimondini, Lia
Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework
title Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework
title_full Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework
title_fullStr Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework
title_full_unstemmed Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework
title_short Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework
title_sort molecular toxicity virtual screening applying a quantized computational snn-based framework
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9919191/
https://www.ncbi.nlm.nih.gov/pubmed/36771009
http://dx.doi.org/10.3390/molecules28031342
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