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Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework
Spiking neural networks are biologically inspired machine learning algorithms attracting researchers’ attention for their applicability to alternative energy-efficient hardware other than traditional computers. In the current work, spiking neural networks have been tested in a quantitative structure...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9919191/ https://www.ncbi.nlm.nih.gov/pubmed/36771009 http://dx.doi.org/10.3390/molecules28031342 |
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author | Nascimben, Mauro Rimondini, Lia |
author_facet | Nascimben, Mauro Rimondini, Lia |
author_sort | Nascimben, Mauro |
collection | PubMed |
description | Spiking neural networks are biologically inspired machine learning algorithms attracting researchers’ attention for their applicability to alternative energy-efficient hardware other than traditional computers. In the current work, spiking neural networks have been tested in a quantitative structure–activity analysis targeting the toxicity of molecules. Multiple public-domain databases of compounds have been evaluated with spiking neural networks, achieving accuracies compatible with high-quality frameworks presented in the previous literature. The numerical experiments also included an analysis of hyperparameters and tested the spiking neural networks on molecular fingerprints of different lengths. Proposing alternatives to traditional software and hardware for time- and resource-consuming tasks, such as those found in chemoinformatics, may open the door to new research and improvements in the field. |
format | Online Article Text |
id | pubmed-9919191 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-99191912023-02-12 Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework Nascimben, Mauro Rimondini, Lia Molecules Article Spiking neural networks are biologically inspired machine learning algorithms attracting researchers’ attention for their applicability to alternative energy-efficient hardware other than traditional computers. In the current work, spiking neural networks have been tested in a quantitative structure–activity analysis targeting the toxicity of molecules. Multiple public-domain databases of compounds have been evaluated with spiking neural networks, achieving accuracies compatible with high-quality frameworks presented in the previous literature. The numerical experiments also included an analysis of hyperparameters and tested the spiking neural networks on molecular fingerprints of different lengths. Proposing alternatives to traditional software and hardware for time- and resource-consuming tasks, such as those found in chemoinformatics, may open the door to new research and improvements in the field. MDPI 2023-01-31 /pmc/articles/PMC9919191/ /pubmed/36771009 http://dx.doi.org/10.3390/molecules28031342 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Nascimben, Mauro Rimondini, Lia Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework |
title | Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework |
title_full | Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework |
title_fullStr | Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework |
title_full_unstemmed | Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework |
title_short | Molecular Toxicity Virtual Screening Applying a Quantized Computational SNN-Based Framework |
title_sort | molecular toxicity virtual screening applying a quantized computational snn-based framework |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9919191/ https://www.ncbi.nlm.nih.gov/pubmed/36771009 http://dx.doi.org/10.3390/molecules28031342 |
work_keys_str_mv | AT nascimbenmauro moleculartoxicityvirtualscreeningapplyingaquantizedcomputationalsnnbasedframework AT rimondinilia moleculartoxicityvirtualscreeningapplyingaquantizedcomputationalsnnbasedframework |