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Retrieval of Leaf Chlorophyll Contents (LCCs) in Litchi Based on Fractional Order Derivatives and VCPA-GA-ML Algorithms

The accurate estimation of leaf chlorophyll content (LCC) is a significant foundation in assessing litchi photosynthetic activity and possible nutrient status. Hyperspectral remote sensing data have been widely used in agricultural quantitative monitoring research for the non-destructive assessment...

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Autores principales: Hasan, Umut, Jia, Kai, Wang, Li, Wang, Chongyang, Shen, Ziqi, Yu, Wenjie, Sun, Yishan, Jiang, Hao, Zhang, Zhicong, Guo, Jinfeng, Wang, Jingzhe, Li, Dan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9919270/
https://www.ncbi.nlm.nih.gov/pubmed/36771586
http://dx.doi.org/10.3390/plants12030501
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author Hasan, Umut
Jia, Kai
Wang, Li
Wang, Chongyang
Shen, Ziqi
Yu, Wenjie
Sun, Yishan
Jiang, Hao
Zhang, Zhicong
Guo, Jinfeng
Wang, Jingzhe
Li, Dan
author_facet Hasan, Umut
Jia, Kai
Wang, Li
Wang, Chongyang
Shen, Ziqi
Yu, Wenjie
Sun, Yishan
Jiang, Hao
Zhang, Zhicong
Guo, Jinfeng
Wang, Jingzhe
Li, Dan
author_sort Hasan, Umut
collection PubMed
description The accurate estimation of leaf chlorophyll content (LCC) is a significant foundation in assessing litchi photosynthetic activity and possible nutrient status. Hyperspectral remote sensing data have been widely used in agricultural quantitative monitoring research for the non-destructive assessment of LCC. Variable selection approaches are crucial for analyzing high-dimensional datasets due to the high danger of overfitting, time-intensiveness, or substantial computational requirements. In this study, the performance of five machine learning regression algorithms (MLRAs) was investigated based on the hyperspectral fractional order derivative (FOD) reflection of 298 leaves together with the variable combination population analysis (VCPA)-genetic algorithm (GA) hybrid strategy in estimating the LCC of Litchi. The results showed that the correlation coefficient (r) between the 0.8-order derivative spectrum and LCC had the highest correlation coefficients (r = 0.9179, p < 0.01). The VCPA-GA hybrid strategy fully utilizes VCPA and GA while compensating for their limitations based on a large number of variables. Moreover, the model was developed using the selected 14 sensitive bands from 0.8-order hyperspectral reflectance data with the lowest root mean square error in prediction (RMSEP = 5.04 [Formula: see text]). Compared with the five MLRAs, validation results confirmed that the ridge regression (RR) algorithm derived from the 0.2 order was the most effective for estimating the LCC with the coefficient of determination (R(2) = 0.88), mean absolute error (MAE = 3.40 [Formula: see text]), root mean square error (RMSE = 4.23 [Formula: see text]), and ratio of performance to inter-quartile distance (RPIQ = 3.59). This study indicates that a hybrid variable selection strategy (VCPA-GA) and MLRAs are very effective in retrieving the LCC through hyperspectral reflectance at the leaf scale. The proposed methods could further provide some scientific basis for the hyperspectral remote sensing band setting of different platforms, such as an unmanned aerial vehicle (UAV) and satellite.
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spelling pubmed-99192702023-02-12 Retrieval of Leaf Chlorophyll Contents (LCCs) in Litchi Based on Fractional Order Derivatives and VCPA-GA-ML Algorithms Hasan, Umut Jia, Kai Wang, Li Wang, Chongyang Shen, Ziqi Yu, Wenjie Sun, Yishan Jiang, Hao Zhang, Zhicong Guo, Jinfeng Wang, Jingzhe Li, Dan Plants (Basel) Article The accurate estimation of leaf chlorophyll content (LCC) is a significant foundation in assessing litchi photosynthetic activity and possible nutrient status. Hyperspectral remote sensing data have been widely used in agricultural quantitative monitoring research for the non-destructive assessment of LCC. Variable selection approaches are crucial for analyzing high-dimensional datasets due to the high danger of overfitting, time-intensiveness, or substantial computational requirements. In this study, the performance of five machine learning regression algorithms (MLRAs) was investigated based on the hyperspectral fractional order derivative (FOD) reflection of 298 leaves together with the variable combination population analysis (VCPA)-genetic algorithm (GA) hybrid strategy in estimating the LCC of Litchi. The results showed that the correlation coefficient (r) between the 0.8-order derivative spectrum and LCC had the highest correlation coefficients (r = 0.9179, p < 0.01). The VCPA-GA hybrid strategy fully utilizes VCPA and GA while compensating for their limitations based on a large number of variables. Moreover, the model was developed using the selected 14 sensitive bands from 0.8-order hyperspectral reflectance data with the lowest root mean square error in prediction (RMSEP = 5.04 [Formula: see text]). Compared with the five MLRAs, validation results confirmed that the ridge regression (RR) algorithm derived from the 0.2 order was the most effective for estimating the LCC with the coefficient of determination (R(2) = 0.88), mean absolute error (MAE = 3.40 [Formula: see text]), root mean square error (RMSE = 4.23 [Formula: see text]), and ratio of performance to inter-quartile distance (RPIQ = 3.59). This study indicates that a hybrid variable selection strategy (VCPA-GA) and MLRAs are very effective in retrieving the LCC through hyperspectral reflectance at the leaf scale. The proposed methods could further provide some scientific basis for the hyperspectral remote sensing band setting of different platforms, such as an unmanned aerial vehicle (UAV) and satellite. MDPI 2023-01-21 /pmc/articles/PMC9919270/ /pubmed/36771586 http://dx.doi.org/10.3390/plants12030501 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Hasan, Umut
Jia, Kai
Wang, Li
Wang, Chongyang
Shen, Ziqi
Yu, Wenjie
Sun, Yishan
Jiang, Hao
Zhang, Zhicong
Guo, Jinfeng
Wang, Jingzhe
Li, Dan
Retrieval of Leaf Chlorophyll Contents (LCCs) in Litchi Based on Fractional Order Derivatives and VCPA-GA-ML Algorithms
title Retrieval of Leaf Chlorophyll Contents (LCCs) in Litchi Based on Fractional Order Derivatives and VCPA-GA-ML Algorithms
title_full Retrieval of Leaf Chlorophyll Contents (LCCs) in Litchi Based on Fractional Order Derivatives and VCPA-GA-ML Algorithms
title_fullStr Retrieval of Leaf Chlorophyll Contents (LCCs) in Litchi Based on Fractional Order Derivatives and VCPA-GA-ML Algorithms
title_full_unstemmed Retrieval of Leaf Chlorophyll Contents (LCCs) in Litchi Based on Fractional Order Derivatives and VCPA-GA-ML Algorithms
title_short Retrieval of Leaf Chlorophyll Contents (LCCs) in Litchi Based on Fractional Order Derivatives and VCPA-GA-ML Algorithms
title_sort retrieval of leaf chlorophyll contents (lccs) in litchi based on fractional order derivatives and vcpa-ga-ml algorithms
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9919270/
https://www.ncbi.nlm.nih.gov/pubmed/36771586
http://dx.doi.org/10.3390/plants12030501
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