Cargando…

Prognosis and clinical features analysis of EMT-related signature and tumor Immune microenvironment in glioma

BACKGROUND: As the most common primary malignant intracranial tumor, glioblastoma has a poor prognosis with limited treatment options. It has a high propensity for recurrence, invasion, and poor immune prognosis due to the complex tumor microenvironment. METHODS: Six groups of samples from four data...

Descripción completa

Detalles Bibliográficos
Autores principales: Xiao, Zheng, Liu, Xiaoyan, Mo, Yixiang, Chen, Weibo, Zhang, Shizhong, Yu, Yingwei, Weng, Huiwen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Society of Medical Biochemists of Serbia, Belgrade 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9920870/
https://www.ncbi.nlm.nih.gov/pubmed/36819132
http://dx.doi.org/10.5937/jomb0-39234
_version_ 1784887176108965888
author Xiao, Zheng
Liu, Xiaoyan
Mo, Yixiang
Chen, Weibo
Zhang, Shizhong
Yu, Yingwei
Weng, Huiwen
author_facet Xiao, Zheng
Liu, Xiaoyan
Mo, Yixiang
Chen, Weibo
Zhang, Shizhong
Yu, Yingwei
Weng, Huiwen
author_sort Xiao, Zheng
collection PubMed
description BACKGROUND: As the most common primary malignant intracranial tumor, glioblastoma has a poor prognosis with limited treatment options. It has a high propensity for recurrence, invasion, and poor immune prognosis due to the complex tumor microenvironment. METHODS: Six groups of samples from four datasets were included in this study. We used consensus ClusterPlus to establish two subgroups by the EMT-related gene. The difference in clinicopathological features, genomic characteristics, immune infiltration, treatment response and prognoses were evaluated by multiple algorithms. By using LASSO regression, multi-factor Cox analysis, stepAIC method, a prognostic risk model was constructed based on the final screened genes. RESULTS: The consensusClusterPlus analyses revealed two subtypes of glioblastoma (C1 and C2), which were characterized by different EMT-related gene expression patterns. C2 subtype with the worse prognosis had the more malignant clinical and pathology manifestations, higher Immune infiltration and tumor-associated molecular pathways scores, and poorer response to treatment. Additionally, our EMT-related genes risk prediction model can provide valuable support for clinical evaluations of glioma. CONCLUSIONS: The assessment system and prediction model displayed good performance in independent prognostic risk assessment and individual patient treatment response prediction. This can help with clinical treatment decisions and the development of effective treatments.
format Online
Article
Text
id pubmed-9920870
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Society of Medical Biochemists of Serbia, Belgrade
record_format MEDLINE/PubMed
spelling pubmed-99208702023-02-16 Prognosis and clinical features analysis of EMT-related signature and tumor Immune microenvironment in glioma Xiao, Zheng Liu, Xiaoyan Mo, Yixiang Chen, Weibo Zhang, Shizhong Yu, Yingwei Weng, Huiwen J Med Biochem Original Paper BACKGROUND: As the most common primary malignant intracranial tumor, glioblastoma has a poor prognosis with limited treatment options. It has a high propensity for recurrence, invasion, and poor immune prognosis due to the complex tumor microenvironment. METHODS: Six groups of samples from four datasets were included in this study. We used consensus ClusterPlus to establish two subgroups by the EMT-related gene. The difference in clinicopathological features, genomic characteristics, immune infiltration, treatment response and prognoses were evaluated by multiple algorithms. By using LASSO regression, multi-factor Cox analysis, stepAIC method, a prognostic risk model was constructed based on the final screened genes. RESULTS: The consensusClusterPlus analyses revealed two subtypes of glioblastoma (C1 and C2), which were characterized by different EMT-related gene expression patterns. C2 subtype with the worse prognosis had the more malignant clinical and pathology manifestations, higher Immune infiltration and tumor-associated molecular pathways scores, and poorer response to treatment. Additionally, our EMT-related genes risk prediction model can provide valuable support for clinical evaluations of glioma. CONCLUSIONS: The assessment system and prediction model displayed good performance in independent prognostic risk assessment and individual patient treatment response prediction. This can help with clinical treatment decisions and the development of effective treatments. Society of Medical Biochemists of Serbia, Belgrade 2023-01-20 2023-01-20 /pmc/articles/PMC9920870/ /pubmed/36819132 http://dx.doi.org/10.5937/jomb0-39234 Text en 2023 Zheng Xiao, Xiaoyan Liu, Yixiang Mo, Weibo Chen, Shizhong Zhang, Yingwei Yu, Huiwen Weng, published by CEON/CEES https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 License.
spellingShingle Original Paper
Xiao, Zheng
Liu, Xiaoyan
Mo, Yixiang
Chen, Weibo
Zhang, Shizhong
Yu, Yingwei
Weng, Huiwen
Prognosis and clinical features analysis of EMT-related signature and tumor Immune microenvironment in glioma
title Prognosis and clinical features analysis of EMT-related signature and tumor Immune microenvironment in glioma
title_full Prognosis and clinical features analysis of EMT-related signature and tumor Immune microenvironment in glioma
title_fullStr Prognosis and clinical features analysis of EMT-related signature and tumor Immune microenvironment in glioma
title_full_unstemmed Prognosis and clinical features analysis of EMT-related signature and tumor Immune microenvironment in glioma
title_short Prognosis and clinical features analysis of EMT-related signature and tumor Immune microenvironment in glioma
title_sort prognosis and clinical features analysis of emt-related signature and tumor immune microenvironment in glioma
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9920870/
https://www.ncbi.nlm.nih.gov/pubmed/36819132
http://dx.doi.org/10.5937/jomb0-39234
work_keys_str_mv AT xiaozheng prognosisandclinicalfeaturesanalysisofemtrelatedsignatureandtumorimmunemicroenvironmentinglioma
AT liuxiaoyan prognosisandclinicalfeaturesanalysisofemtrelatedsignatureandtumorimmunemicroenvironmentinglioma
AT moyixiang prognosisandclinicalfeaturesanalysisofemtrelatedsignatureandtumorimmunemicroenvironmentinglioma
AT chenweibo prognosisandclinicalfeaturesanalysisofemtrelatedsignatureandtumorimmunemicroenvironmentinglioma
AT zhangshizhong prognosisandclinicalfeaturesanalysisofemtrelatedsignatureandtumorimmunemicroenvironmentinglioma
AT yuyingwei prognosisandclinicalfeaturesanalysisofemtrelatedsignatureandtumorimmunemicroenvironmentinglioma
AT wenghuiwen prognosisandclinicalfeaturesanalysisofemtrelatedsignatureandtumorimmunemicroenvironmentinglioma