Cargando…
Relevance of (18)F-DOPA visual and semi-quantitative PET metrics for the diagnostic of Parkinson disease in clinical practice: a machine learning-based inference study
PURPOSE: To decipher the relevance of visual and semi-quantitative 6-fluoro-(18F)-L-DOPA ((18)F-DOPA) interpretation methods for the diagnostic of idiopathic Parkinson disease (IPD) in hybrid positron emission tomography (PET) and magnetic resonance imaging. MATERIAL AND METHODS: A total of 110 cons...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9925664/ https://www.ncbi.nlm.nih.gov/pubmed/36780091 http://dx.doi.org/10.1186/s13550-023-00962-x |
_version_ | 1784888108306661376 |
---|---|
author | Iep, Alex Chawki, Mohammad B. Goldfarb, Lucas Nguyen, Loc Brulon, Vincent Comtat, Claude Lebon, Vincent Besson, Florent L. |
author_facet | Iep, Alex Chawki, Mohammad B. Goldfarb, Lucas Nguyen, Loc Brulon, Vincent Comtat, Claude Lebon, Vincent Besson, Florent L. |
author_sort | Iep, Alex |
collection | PubMed |
description | PURPOSE: To decipher the relevance of visual and semi-quantitative 6-fluoro-(18F)-L-DOPA ((18)F-DOPA) interpretation methods for the diagnostic of idiopathic Parkinson disease (IPD) in hybrid positron emission tomography (PET) and magnetic resonance imaging. MATERIAL AND METHODS: A total of 110 consecutive patients (48 IPD and 62 controls) with 11 months of median clinical follow-up (reference standard) were included. A composite visual assessment from five independent nuclear imaging readers, together with striatal standard uptake value (SUV) to occipital SUV ratio, striatal gradients and putamen asymmetry-based semi-quantitative PET metrics automatically extracted used to train machine learning models to classify IPD versus controls. Using a ratio of 70/30 for training and testing sets, respectively, five classification models—k-NN, LogRegression, support vector machine, random forest and gradient boosting—were trained by using 100 times repeated nested cross-validation procedures. From the best model on average, the contribution of PET parameters was deciphered using the Shapley additive explanations method (SHAP). Cross-validated receiver operating characteristic curves (cv-ROC) of the most contributive PET parameters were finally estimated and compared. RESULTS: The best machine learning model (k-NN) provided final cv-ROC of 0.81. According to SHAP analyses, visual PET metric was the most important contributor to the model overall performance, followed by the minimum between left and right striatal to occipital SUV ratio. The 10-time cv-ROC curves of visual, min SUVr or both showed quite similar performance (mean area under the ROC of 0.81, 0.81 and 0.79, respectively, for visual, min SUVr or both). CONCLUSION: Visual expert analysis remains the most relevant parameter to predict IPD diagnosis at 11 months of median clinical follow-up in (18)F-FDOPA. The min SUV ratio appears interesting in the perspective of simple semi-automated diagnostic workflows. |
format | Online Article Text |
id | pubmed-9925664 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-99256642023-02-15 Relevance of (18)F-DOPA visual and semi-quantitative PET metrics for the diagnostic of Parkinson disease in clinical practice: a machine learning-based inference study Iep, Alex Chawki, Mohammad B. Goldfarb, Lucas Nguyen, Loc Brulon, Vincent Comtat, Claude Lebon, Vincent Besson, Florent L. EJNMMI Res Original Research PURPOSE: To decipher the relevance of visual and semi-quantitative 6-fluoro-(18F)-L-DOPA ((18)F-DOPA) interpretation methods for the diagnostic of idiopathic Parkinson disease (IPD) in hybrid positron emission tomography (PET) and magnetic resonance imaging. MATERIAL AND METHODS: A total of 110 consecutive patients (48 IPD and 62 controls) with 11 months of median clinical follow-up (reference standard) were included. A composite visual assessment from five independent nuclear imaging readers, together with striatal standard uptake value (SUV) to occipital SUV ratio, striatal gradients and putamen asymmetry-based semi-quantitative PET metrics automatically extracted used to train machine learning models to classify IPD versus controls. Using a ratio of 70/30 for training and testing sets, respectively, five classification models—k-NN, LogRegression, support vector machine, random forest and gradient boosting—were trained by using 100 times repeated nested cross-validation procedures. From the best model on average, the contribution of PET parameters was deciphered using the Shapley additive explanations method (SHAP). Cross-validated receiver operating characteristic curves (cv-ROC) of the most contributive PET parameters were finally estimated and compared. RESULTS: The best machine learning model (k-NN) provided final cv-ROC of 0.81. According to SHAP analyses, visual PET metric was the most important contributor to the model overall performance, followed by the minimum between left and right striatal to occipital SUV ratio. The 10-time cv-ROC curves of visual, min SUVr or both showed quite similar performance (mean area under the ROC of 0.81, 0.81 and 0.79, respectively, for visual, min SUVr or both). CONCLUSION: Visual expert analysis remains the most relevant parameter to predict IPD diagnosis at 11 months of median clinical follow-up in (18)F-FDOPA. The min SUV ratio appears interesting in the perspective of simple semi-automated diagnostic workflows. Springer Berlin Heidelberg 2023-02-13 /pmc/articles/PMC9925664/ /pubmed/36780091 http://dx.doi.org/10.1186/s13550-023-00962-x Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Research Iep, Alex Chawki, Mohammad B. Goldfarb, Lucas Nguyen, Loc Brulon, Vincent Comtat, Claude Lebon, Vincent Besson, Florent L. Relevance of (18)F-DOPA visual and semi-quantitative PET metrics for the diagnostic of Parkinson disease in clinical practice: a machine learning-based inference study |
title | Relevance of (18)F-DOPA visual and semi-quantitative PET metrics for the diagnostic of Parkinson disease in clinical practice: a machine learning-based inference study |
title_full | Relevance of (18)F-DOPA visual and semi-quantitative PET metrics for the diagnostic of Parkinson disease in clinical practice: a machine learning-based inference study |
title_fullStr | Relevance of (18)F-DOPA visual and semi-quantitative PET metrics for the diagnostic of Parkinson disease in clinical practice: a machine learning-based inference study |
title_full_unstemmed | Relevance of (18)F-DOPA visual and semi-quantitative PET metrics for the diagnostic of Parkinson disease in clinical practice: a machine learning-based inference study |
title_short | Relevance of (18)F-DOPA visual and semi-quantitative PET metrics for the diagnostic of Parkinson disease in clinical practice: a machine learning-based inference study |
title_sort | relevance of (18)f-dopa visual and semi-quantitative pet metrics for the diagnostic of parkinson disease in clinical practice: a machine learning-based inference study |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9925664/ https://www.ncbi.nlm.nih.gov/pubmed/36780091 http://dx.doi.org/10.1186/s13550-023-00962-x |
work_keys_str_mv | AT iepalex relevanceof18fdopavisualandsemiquantitativepetmetricsforthediagnosticofparkinsondiseaseinclinicalpracticeamachinelearningbasedinferencestudy AT chawkimohammadb relevanceof18fdopavisualandsemiquantitativepetmetricsforthediagnosticofparkinsondiseaseinclinicalpracticeamachinelearningbasedinferencestudy AT goldfarblucas relevanceof18fdopavisualandsemiquantitativepetmetricsforthediagnosticofparkinsondiseaseinclinicalpracticeamachinelearningbasedinferencestudy AT nguyenloc relevanceof18fdopavisualandsemiquantitativepetmetricsforthediagnosticofparkinsondiseaseinclinicalpracticeamachinelearningbasedinferencestudy AT brulonvincent relevanceof18fdopavisualandsemiquantitativepetmetricsforthediagnosticofparkinsondiseaseinclinicalpracticeamachinelearningbasedinferencestudy AT comtatclaude relevanceof18fdopavisualandsemiquantitativepetmetricsforthediagnosticofparkinsondiseaseinclinicalpracticeamachinelearningbasedinferencestudy AT lebonvincent relevanceof18fdopavisualandsemiquantitativepetmetricsforthediagnosticofparkinsondiseaseinclinicalpracticeamachinelearningbasedinferencestudy AT bessonflorentl relevanceof18fdopavisualandsemiquantitativepetmetricsforthediagnosticofparkinsondiseaseinclinicalpracticeamachinelearningbasedinferencestudy |