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Extending density functional theory with near chemical accuracy beyond pure water
Density functional simulations of condensed phase water are typically inaccurate, due to the inaccuracies of approximate functionals. A recent breakthrough showed that the SCAN approximation can yield chemical accuracy for pure water in all its phases, but only when its density is corrected. This is...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9925738/ https://www.ncbi.nlm.nih.gov/pubmed/36781855 http://dx.doi.org/10.1038/s41467-023-36094-y |
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author | Song, Suhwan Vuckovic, Stefan Kim, Youngsam Yu, Hayoung Sim, Eunji Burke, Kieron |
author_facet | Song, Suhwan Vuckovic, Stefan Kim, Youngsam Yu, Hayoung Sim, Eunji Burke, Kieron |
author_sort | Song, Suhwan |
collection | PubMed |
description | Density functional simulations of condensed phase water are typically inaccurate, due to the inaccuracies of approximate functionals. A recent breakthrough showed that the SCAN approximation can yield chemical accuracy for pure water in all its phases, but only when its density is corrected. This is a crucial step toward first-principles biosimulations. However, weak dispersion forces are ubiquitous and play a key role in noncovalent interactions among biomolecules, but are not included in the new approach. Moreover, naïve inclusion of dispersion in HF-SCAN ruins its high accuracy for pure water. Here we show that systematic application of the principles of density-corrected DFT yields a functional (HF-r(2)SCAN-DC4) which recovers and not only improves over HF-SCAN for pure water, but also captures vital noncovalent interactions in biomolecules, making it suitable for simulations of solutions. |
format | Online Article Text |
id | pubmed-9925738 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-99257382023-02-15 Extending density functional theory with near chemical accuracy beyond pure water Song, Suhwan Vuckovic, Stefan Kim, Youngsam Yu, Hayoung Sim, Eunji Burke, Kieron Nat Commun Article Density functional simulations of condensed phase water are typically inaccurate, due to the inaccuracies of approximate functionals. A recent breakthrough showed that the SCAN approximation can yield chemical accuracy for pure water in all its phases, but only when its density is corrected. This is a crucial step toward first-principles biosimulations. However, weak dispersion forces are ubiquitous and play a key role in noncovalent interactions among biomolecules, but are not included in the new approach. Moreover, naïve inclusion of dispersion in HF-SCAN ruins its high accuracy for pure water. Here we show that systematic application of the principles of density-corrected DFT yields a functional (HF-r(2)SCAN-DC4) which recovers and not only improves over HF-SCAN for pure water, but also captures vital noncovalent interactions in biomolecules, making it suitable for simulations of solutions. Nature Publishing Group UK 2023-02-13 /pmc/articles/PMC9925738/ /pubmed/36781855 http://dx.doi.org/10.1038/s41467-023-36094-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Song, Suhwan Vuckovic, Stefan Kim, Youngsam Yu, Hayoung Sim, Eunji Burke, Kieron Extending density functional theory with near chemical accuracy beyond pure water |
title | Extending density functional theory with near chemical accuracy beyond pure water |
title_full | Extending density functional theory with near chemical accuracy beyond pure water |
title_fullStr | Extending density functional theory with near chemical accuracy beyond pure water |
title_full_unstemmed | Extending density functional theory with near chemical accuracy beyond pure water |
title_short | Extending density functional theory with near chemical accuracy beyond pure water |
title_sort | extending density functional theory with near chemical accuracy beyond pure water |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9925738/ https://www.ncbi.nlm.nih.gov/pubmed/36781855 http://dx.doi.org/10.1038/s41467-023-36094-y |
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