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Generalizability and performance of methods to detect non-wear with free-living accelerometer recordings
Wearable physical activity sensors are widely used in research and practice as they provide objective measures of human behavior at a low cost. An important challenge for accurate assessment of physical activity behavior in free-living is the detection non-wear. Traditionally, heuristic algorithms t...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9925815/ https://www.ncbi.nlm.nih.gov/pubmed/36782015 http://dx.doi.org/10.1038/s41598-023-29666-x |
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author | Skovgaard, Esben Lykke Roswall, Malthe Andreas Pedersen, Natascha Holbæk Larsen, Kristian Traberg Grøntved, Anders Brønd, Jan Christian |
author_facet | Skovgaard, Esben Lykke Roswall, Malthe Andreas Pedersen, Natascha Holbæk Larsen, Kristian Traberg Grøntved, Anders Brønd, Jan Christian |
author_sort | Skovgaard, Esben Lykke |
collection | PubMed |
description | Wearable physical activity sensors are widely used in research and practice as they provide objective measures of human behavior at a low cost. An important challenge for accurate assessment of physical activity behavior in free-living is the detection non-wear. Traditionally, heuristic algorithms that rely on specific interval lengths have been employed to detect non-wear time; however, machine learned models are emerging. We explore the potential of detecting non-wear using decision trees that combine raw acceleration and skin temperature, and we investigate the generalizability of our models, traditional heuristic algorithms, and recently developed machine learned models by external validation. The Decision tree models were trained using one week of data from thigh- and hip-worn accelerometers from 64 children. External validation was performed using data from wrist-worn accelerometers of 42 adolescents. For non-wear episodes longer than 60 min, the heuristic algorithms performed the best with F1-scores above 0.96. However, regarding episodes shorter than 60 min, the best performing method was the decision tree model including the six most important predictors with F1 scores above 0.74 for all sensor locations. We conclude that for classifying non-wear time, researchers should carefully select an appropriate method and we encourage the use of external validation when reporting on machine learned non-wear models. |
format | Online Article Text |
id | pubmed-9925815 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-99258152023-02-15 Generalizability and performance of methods to detect non-wear with free-living accelerometer recordings Skovgaard, Esben Lykke Roswall, Malthe Andreas Pedersen, Natascha Holbæk Larsen, Kristian Traberg Grøntved, Anders Brønd, Jan Christian Sci Rep Article Wearable physical activity sensors are widely used in research and practice as they provide objective measures of human behavior at a low cost. An important challenge for accurate assessment of physical activity behavior in free-living is the detection non-wear. Traditionally, heuristic algorithms that rely on specific interval lengths have been employed to detect non-wear time; however, machine learned models are emerging. We explore the potential of detecting non-wear using decision trees that combine raw acceleration and skin temperature, and we investigate the generalizability of our models, traditional heuristic algorithms, and recently developed machine learned models by external validation. The Decision tree models were trained using one week of data from thigh- and hip-worn accelerometers from 64 children. External validation was performed using data from wrist-worn accelerometers of 42 adolescents. For non-wear episodes longer than 60 min, the heuristic algorithms performed the best with F1-scores above 0.96. However, regarding episodes shorter than 60 min, the best performing method was the decision tree model including the six most important predictors with F1 scores above 0.74 for all sensor locations. We conclude that for classifying non-wear time, researchers should carefully select an appropriate method and we encourage the use of external validation when reporting on machine learned non-wear models. Nature Publishing Group UK 2023-02-13 /pmc/articles/PMC9925815/ /pubmed/36782015 http://dx.doi.org/10.1038/s41598-023-29666-x Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Skovgaard, Esben Lykke Roswall, Malthe Andreas Pedersen, Natascha Holbæk Larsen, Kristian Traberg Grøntved, Anders Brønd, Jan Christian Generalizability and performance of methods to detect non-wear with free-living accelerometer recordings |
title | Generalizability and performance of methods to detect non-wear with free-living accelerometer recordings |
title_full | Generalizability and performance of methods to detect non-wear with free-living accelerometer recordings |
title_fullStr | Generalizability and performance of methods to detect non-wear with free-living accelerometer recordings |
title_full_unstemmed | Generalizability and performance of methods to detect non-wear with free-living accelerometer recordings |
title_short | Generalizability and performance of methods to detect non-wear with free-living accelerometer recordings |
title_sort | generalizability and performance of methods to detect non-wear with free-living accelerometer recordings |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9925815/ https://www.ncbi.nlm.nih.gov/pubmed/36782015 http://dx.doi.org/10.1038/s41598-023-29666-x |
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