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Estimated Impact of Low Isolate Numbers on the Reliability of Cumulative Antibiogram Data
Antibiograms are cumulative reports of antimicrobial susceptibility results that are used to guide the selection of empirical antibiotic therapy. Although Clinical and Laboratory Standards Institute (CLSI) guidelines recommend including only organisms that have at least 30 isolates in an antibiogram...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Microbiology
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9927543/ https://www.ncbi.nlm.nih.gov/pubmed/36625572 http://dx.doi.org/10.1128/spectrum.03939-22 |
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author | Tran, Christian Hargy, John Hess, Bryan Pettengill, Matthew A. |
author_facet | Tran, Christian Hargy, John Hess, Bryan Pettengill, Matthew A. |
author_sort | Tran, Christian |
collection | PubMed |
description | Antibiograms are cumulative reports of antimicrobial susceptibility results that are used to guide the selection of empirical antibiotic therapy. Although Clinical and Laboratory Standards Institute (CLSI) guidelines recommend including only organisms that have at least 30 isolates in an antibiogram, previous studies demonstrated that adherence to this recommendation is highly variable. This paper aims to model the impact of small sample sizes on expected levels of error in cumulative antibiograms by comparing percent susceptibility results for random samples to those of the larger, entire data set. The results demonstrate relatively high error rates when utilizing low numbers of isolates in cumulative antibiograms, and provide a discussion point for considering the appropriate number of isolates that could be utilized, and the impact of increasing isolate numbers by including multiple years of data. IMPORTANCE Antibiograms are reports of local antimicrobial susceptibility patterns for common bacteria and yeast that are used to make empirical decisions for patient therapy and also to inform institution therapy guidelines. This study evaluates the impact of low isolate counts on the reliability of antibiograms, and suggests that more institutions should utilize multiple years of data to overcome this issue. |
format | Online Article Text |
id | pubmed-9927543 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Society for Microbiology |
record_format | MEDLINE/PubMed |
spelling | pubmed-99275432023-02-15 Estimated Impact of Low Isolate Numbers on the Reliability of Cumulative Antibiogram Data Tran, Christian Hargy, John Hess, Bryan Pettengill, Matthew A. Microbiol Spectr Research Article Antibiograms are cumulative reports of antimicrobial susceptibility results that are used to guide the selection of empirical antibiotic therapy. Although Clinical and Laboratory Standards Institute (CLSI) guidelines recommend including only organisms that have at least 30 isolates in an antibiogram, previous studies demonstrated that adherence to this recommendation is highly variable. This paper aims to model the impact of small sample sizes on expected levels of error in cumulative antibiograms by comparing percent susceptibility results for random samples to those of the larger, entire data set. The results demonstrate relatively high error rates when utilizing low numbers of isolates in cumulative antibiograms, and provide a discussion point for considering the appropriate number of isolates that could be utilized, and the impact of increasing isolate numbers by including multiple years of data. IMPORTANCE Antibiograms are reports of local antimicrobial susceptibility patterns for common bacteria and yeast that are used to make empirical decisions for patient therapy and also to inform institution therapy guidelines. This study evaluates the impact of low isolate counts on the reliability of antibiograms, and suggests that more institutions should utilize multiple years of data to overcome this issue. American Society for Microbiology 2023-01-10 /pmc/articles/PMC9927543/ /pubmed/36625572 http://dx.doi.org/10.1128/spectrum.03939-22 Text en Copyright © 2023 Tran et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Article Tran, Christian Hargy, John Hess, Bryan Pettengill, Matthew A. Estimated Impact of Low Isolate Numbers on the Reliability of Cumulative Antibiogram Data |
title | Estimated Impact of Low Isolate Numbers on the Reliability of Cumulative Antibiogram Data |
title_full | Estimated Impact of Low Isolate Numbers on the Reliability of Cumulative Antibiogram Data |
title_fullStr | Estimated Impact of Low Isolate Numbers on the Reliability of Cumulative Antibiogram Data |
title_full_unstemmed | Estimated Impact of Low Isolate Numbers on the Reliability of Cumulative Antibiogram Data |
title_short | Estimated Impact of Low Isolate Numbers on the Reliability of Cumulative Antibiogram Data |
title_sort | estimated impact of low isolate numbers on the reliability of cumulative antibiogram data |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9927543/ https://www.ncbi.nlm.nih.gov/pubmed/36625572 http://dx.doi.org/10.1128/spectrum.03939-22 |
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