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Automatic counting of rapeseed inflorescences using deep learning method and UAV RGB imagery
Flowering is a crucial developing stage for rapeseed (Brassica napus L.) plants. Flowers develop on the main and branch inflorescences of rapeseed plants and then grow into siliques. The seed yield of rapeseed heavily depends on the total flower numbers per area throughout the whole flowering period...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9928208/ https://www.ncbi.nlm.nih.gov/pubmed/36798713 http://dx.doi.org/10.3389/fpls.2023.1101143 |
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author | Li, Jie Li, Yi Qiao, Jiangwei Li, Li Wang, Xinfa Yao, Jian Liao, Guisheng |
author_facet | Li, Jie Li, Yi Qiao, Jiangwei Li, Li Wang, Xinfa Yao, Jian Liao, Guisheng |
author_sort | Li, Jie |
collection | PubMed |
description | Flowering is a crucial developing stage for rapeseed (Brassica napus L.) plants. Flowers develop on the main and branch inflorescences of rapeseed plants and then grow into siliques. The seed yield of rapeseed heavily depends on the total flower numbers per area throughout the whole flowering period. The number of rapeseed inflorescences can reflect the richness of rapeseed flowers and provide useful information for yield prediction. To count rapeseed inflorescences automatically, we transferred the counting problem to a detection task. Then, we developed a low-cost approach for counting rapeseed inflorescences using YOLOv5 with the Convolutional Block Attention Module (CBAM) based on unmanned aerial vehicle (UAV) Red–Green–Blue (RGB) imagery. Moreover, we constructed a Rapeseed Inflorescence Benchmark (RIB) to verify the effectiveness of our model. The RIB dataset captured by DJI Phantom 4 Pro V2.0, including 165 plot images and 60,000 manual labels, is to be released. Experimental results showed that indicators R(2) for counting and the mean Average Precision (mAP) for location were over 0.96 and 92%, respectively. Compared with Faster R-CNN, YOLOv4, CenterNet, and TasselNetV2+, the proposed method achieved state-of-the-art counting performance on RIB and had advantages in location accuracy. The counting results revealed a quantitative dynamic change in the number of rapeseed inflorescences in the time dimension. Furthermore, a significant positive correlation between the actual crop yield and the automatically obtained rapeseed inflorescence total number on a field plot level was identified. Thus, a set of UAV- assisted methods for better determination of the flower richness was developed, which can greatly support the breeding of high-yield rapeseed varieties. |
format | Online Article Text |
id | pubmed-9928208 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99282082023-02-15 Automatic counting of rapeseed inflorescences using deep learning method and UAV RGB imagery Li, Jie Li, Yi Qiao, Jiangwei Li, Li Wang, Xinfa Yao, Jian Liao, Guisheng Front Plant Sci Plant Science Flowering is a crucial developing stage for rapeseed (Brassica napus L.) plants. Flowers develop on the main and branch inflorescences of rapeseed plants and then grow into siliques. The seed yield of rapeseed heavily depends on the total flower numbers per area throughout the whole flowering period. The number of rapeseed inflorescences can reflect the richness of rapeseed flowers and provide useful information for yield prediction. To count rapeseed inflorescences automatically, we transferred the counting problem to a detection task. Then, we developed a low-cost approach for counting rapeseed inflorescences using YOLOv5 with the Convolutional Block Attention Module (CBAM) based on unmanned aerial vehicle (UAV) Red–Green–Blue (RGB) imagery. Moreover, we constructed a Rapeseed Inflorescence Benchmark (RIB) to verify the effectiveness of our model. The RIB dataset captured by DJI Phantom 4 Pro V2.0, including 165 plot images and 60,000 manual labels, is to be released. Experimental results showed that indicators R(2) for counting and the mean Average Precision (mAP) for location were over 0.96 and 92%, respectively. Compared with Faster R-CNN, YOLOv4, CenterNet, and TasselNetV2+, the proposed method achieved state-of-the-art counting performance on RIB and had advantages in location accuracy. The counting results revealed a quantitative dynamic change in the number of rapeseed inflorescences in the time dimension. Furthermore, a significant positive correlation between the actual crop yield and the automatically obtained rapeseed inflorescence total number on a field plot level was identified. Thus, a set of UAV- assisted methods for better determination of the flower richness was developed, which can greatly support the breeding of high-yield rapeseed varieties. Frontiers Media S.A. 2023-01-31 /pmc/articles/PMC9928208/ /pubmed/36798713 http://dx.doi.org/10.3389/fpls.2023.1101143 Text en Copyright © 2023 Li, Li, Qiao, Li, Wang, Yao and Liao https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Li, Jie Li, Yi Qiao, Jiangwei Li, Li Wang, Xinfa Yao, Jian Liao, Guisheng Automatic counting of rapeseed inflorescences using deep learning method and UAV RGB imagery |
title | Automatic counting of rapeseed inflorescences using deep learning method and UAV RGB imagery |
title_full | Automatic counting of rapeseed inflorescences using deep learning method and UAV RGB imagery |
title_fullStr | Automatic counting of rapeseed inflorescences using deep learning method and UAV RGB imagery |
title_full_unstemmed | Automatic counting of rapeseed inflorescences using deep learning method and UAV RGB imagery |
title_short | Automatic counting of rapeseed inflorescences using deep learning method and UAV RGB imagery |
title_sort | automatic counting of rapeseed inflorescences using deep learning method and uav rgb imagery |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9928208/ https://www.ncbi.nlm.nih.gov/pubmed/36798713 http://dx.doi.org/10.3389/fpls.2023.1101143 |
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