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High expression of COL6A1 predicts poor prognosis and response to immunotherapy in bladder cancer

Extracellular matrix (ECM), as an important framework for tumor microenvironment, plays important roles in many critical processes, including tumor growth, invasion, immune suppression, and drug resistance. However, few biomarkers of ECM-related genes (ERGs) have been developed for prognosis predict...

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Autores principales: Zhang, Xuezhou, Liu, Jing, Yang, Xuecheng, Jiao, Wei, Shen, Chengquan, Zhao, Xinzhao, Wang, Yonghua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9928451/
https://www.ncbi.nlm.nih.gov/pubmed/36474424
http://dx.doi.org/10.1080/15384101.2022.2154551
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author Zhang, Xuezhou
Liu, Jing
Yang, Xuecheng
Jiao, Wei
Shen, Chengquan
Zhao, Xinzhao
Wang, Yonghua
author_facet Zhang, Xuezhou
Liu, Jing
Yang, Xuecheng
Jiao, Wei
Shen, Chengquan
Zhao, Xinzhao
Wang, Yonghua
author_sort Zhang, Xuezhou
collection PubMed
description Extracellular matrix (ECM), as an important framework for tumor microenvironment, plays important roles in many critical processes, including tumor growth, invasion, immune suppression, and drug resistance. However, few biomarkers of ECM-related genes (ERGs) have been developed for prognosis prediction and clinical treatment of bladder cancer (BC) patients. Bioinformatics analysis and LC-MS/MS analysis were used to screen differentially expressed ERGs in BC. Multivariate Cox regression analysis and Lasso regression analysis were used to construct and validate an ERGs-based prognostic prediction model for BC. Immunohistochemistry was used to detect the protein expression of hub gene-COL6A1 in BC patients. Using bioinformatics analysis from The Cancer Genome Atlas (TCGA) database and proteomic analysis from our BC cohort, we constructed and validated an effective prognostic prediction model for BC patients based on four differentially expressed ERGs (MAP1B, FBN1, COL6A1, and MFAP5). Moreover, we identified human collagen VI-COL6A1 was a hub gene in this prognostic prediction model and found that COL6A1 was closely related to malignancy progression, prognosis, and response to PD-1 inhibitor immunotherapy in BC. Our findings highlight the satisfactory predictive value of ECM-related prognostic models in BC and suggested that COL6A1 may be a potential biomarker in predicting malignant progression, prognosis, and efficacy of immunotherapy in BC.
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spelling pubmed-99284512023-02-15 High expression of COL6A1 predicts poor prognosis and response to immunotherapy in bladder cancer Zhang, Xuezhou Liu, Jing Yang, Xuecheng Jiao, Wei Shen, Chengquan Zhao, Xinzhao Wang, Yonghua Cell Cycle Research Paper Extracellular matrix (ECM), as an important framework for tumor microenvironment, plays important roles in many critical processes, including tumor growth, invasion, immune suppression, and drug resistance. However, few biomarkers of ECM-related genes (ERGs) have been developed for prognosis prediction and clinical treatment of bladder cancer (BC) patients. Bioinformatics analysis and LC-MS/MS analysis were used to screen differentially expressed ERGs in BC. Multivariate Cox regression analysis and Lasso regression analysis were used to construct and validate an ERGs-based prognostic prediction model for BC. Immunohistochemistry was used to detect the protein expression of hub gene-COL6A1 in BC patients. Using bioinformatics analysis from The Cancer Genome Atlas (TCGA) database and proteomic analysis from our BC cohort, we constructed and validated an effective prognostic prediction model for BC patients based on four differentially expressed ERGs (MAP1B, FBN1, COL6A1, and MFAP5). Moreover, we identified human collagen VI-COL6A1 was a hub gene in this prognostic prediction model and found that COL6A1 was closely related to malignancy progression, prognosis, and response to PD-1 inhibitor immunotherapy in BC. Our findings highlight the satisfactory predictive value of ECM-related prognostic models in BC and suggested that COL6A1 may be a potential biomarker in predicting malignant progression, prognosis, and efficacy of immunotherapy in BC. Taylor & Francis 2022-12-06 /pmc/articles/PMC9928451/ /pubmed/36474424 http://dx.doi.org/10.1080/15384101.2022.2154551 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License (http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited, and is not altered, transformed, or built upon in any way.
spellingShingle Research Paper
Zhang, Xuezhou
Liu, Jing
Yang, Xuecheng
Jiao, Wei
Shen, Chengquan
Zhao, Xinzhao
Wang, Yonghua
High expression of COL6A1 predicts poor prognosis and response to immunotherapy in bladder cancer
title High expression of COL6A1 predicts poor prognosis and response to immunotherapy in bladder cancer
title_full High expression of COL6A1 predicts poor prognosis and response to immunotherapy in bladder cancer
title_fullStr High expression of COL6A1 predicts poor prognosis and response to immunotherapy in bladder cancer
title_full_unstemmed High expression of COL6A1 predicts poor prognosis and response to immunotherapy in bladder cancer
title_short High expression of COL6A1 predicts poor prognosis and response to immunotherapy in bladder cancer
title_sort high expression of col6a1 predicts poor prognosis and response to immunotherapy in bladder cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9928451/
https://www.ncbi.nlm.nih.gov/pubmed/36474424
http://dx.doi.org/10.1080/15384101.2022.2154551
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