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Whole-genome sequence of Macaca fascicularis: liver tissue

OBJECTIVES: Thrombocytopenia is a condition that causes a low amount of blood platelets. Platelets are blood cells that play an essential role in blood coagulation. Therefore, thrombocytopenia can put the patient at risk for mild to severe bleeding. Thrombocytopenia is caused by a decrease in platel...

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Autores principales: Seo, Eun-Hye, Kim, Jeong-Hwan, Kim, Da-Hee, Oh, Jung-Hwa, Kim, Seon-Young
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9930273/
https://www.ncbi.nlm.nih.gov/pubmed/36788535
http://dx.doi.org/10.1186/s12863-023-01114-9
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author Seo, Eun-Hye
Kim, Jeong-Hwan
Kim, Da-Hee
Oh, Jung-Hwa
Kim, Seon-Young
author_facet Seo, Eun-Hye
Kim, Jeong-Hwan
Kim, Da-Hee
Oh, Jung-Hwa
Kim, Seon-Young
author_sort Seo, Eun-Hye
collection PubMed
description OBJECTIVES: Thrombocytopenia is a condition that causes a low amount of blood platelets. Platelets are blood cells that play an essential role in blood coagulation. Therefore, thrombocytopenia can put the patient at risk for mild to severe bleeding. Thrombocytopenia is caused by a decrease in platelet production in the bone marrow or by a drug or immune system problem when production is normal. In particular, in some ASO-induced thrombocytopenia, the mechanism is not clear. Therefore, whole genome sequencing (WGS) was performed to discover genetic differences that affect thrombocytopenia and individual susceptibility to drugs between normal and reduced platelet monkeys despite administering the same ASO. DATA DESCRIPTION: Three antisense oligonucleotide (ASO) substances were injected into the subcutaneous tissue of monkeys for 12 weeks in two experiments. The monkeys were classified into three groups: monkeys with thrombocytopenia, monkeys without thrombocytopenia, and control monkeys not treated with ASO substances. Whole genome sequencing data was generated using liver tissues of monkeys. These data will be useful for identifying genetic differences that affect thrombocytopenia and drug sensitivity. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12863-023-01114-9.
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spelling pubmed-99302732023-02-16 Whole-genome sequence of Macaca fascicularis: liver tissue Seo, Eun-Hye Kim, Jeong-Hwan Kim, Da-Hee Oh, Jung-Hwa Kim, Seon-Young BMC Genom Data Data Note OBJECTIVES: Thrombocytopenia is a condition that causes a low amount of blood platelets. Platelets are blood cells that play an essential role in blood coagulation. Therefore, thrombocytopenia can put the patient at risk for mild to severe bleeding. Thrombocytopenia is caused by a decrease in platelet production in the bone marrow or by a drug or immune system problem when production is normal. In particular, in some ASO-induced thrombocytopenia, the mechanism is not clear. Therefore, whole genome sequencing (WGS) was performed to discover genetic differences that affect thrombocytopenia and individual susceptibility to drugs between normal and reduced platelet monkeys despite administering the same ASO. DATA DESCRIPTION: Three antisense oligonucleotide (ASO) substances were injected into the subcutaneous tissue of monkeys for 12 weeks in two experiments. The monkeys were classified into three groups: monkeys with thrombocytopenia, monkeys without thrombocytopenia, and control monkeys not treated with ASO substances. Whole genome sequencing data was generated using liver tissues of monkeys. These data will be useful for identifying genetic differences that affect thrombocytopenia and drug sensitivity. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12863-023-01114-9. BioMed Central 2023-02-14 /pmc/articles/PMC9930273/ /pubmed/36788535 http://dx.doi.org/10.1186/s12863-023-01114-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Data Note
Seo, Eun-Hye
Kim, Jeong-Hwan
Kim, Da-Hee
Oh, Jung-Hwa
Kim, Seon-Young
Whole-genome sequence of Macaca fascicularis: liver tissue
title Whole-genome sequence of Macaca fascicularis: liver tissue
title_full Whole-genome sequence of Macaca fascicularis: liver tissue
title_fullStr Whole-genome sequence of Macaca fascicularis: liver tissue
title_full_unstemmed Whole-genome sequence of Macaca fascicularis: liver tissue
title_short Whole-genome sequence of Macaca fascicularis: liver tissue
title_sort whole-genome sequence of macaca fascicularis: liver tissue
topic Data Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9930273/
https://www.ncbi.nlm.nih.gov/pubmed/36788535
http://dx.doi.org/10.1186/s12863-023-01114-9
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