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Developmental validation of the novel six-dye Goldeneye(TM) DNA ID System 35InDel kit for forensic application
Insertion/deletion polymorphisms (InDels) have been treated as a prospective and helpful genetic marker in the fields of forensic human identification, anthropology and population genetics for the past few years. In this study, we developed a six-dye multiplex typing system consisting of 34 autosoma...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9930762/ https://www.ncbi.nlm.nih.gov/pubmed/36817233 http://dx.doi.org/10.1080/20961790.2021.1945723 |
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author | Yang, Qi Yu, Huan Qu, Yiling Zhang, Xiaochun Xia, Ruocheng Wang, Ziwei Tan, Rui Xiong, Lei Xi, Shihan Wu, Jun Gao, Yuzhen Zhang, Suhua Li, Chengtao |
author_facet | Yang, Qi Yu, Huan Qu, Yiling Zhang, Xiaochun Xia, Ruocheng Wang, Ziwei Tan, Rui Xiong, Lei Xi, Shihan Wu, Jun Gao, Yuzhen Zhang, Suhua Li, Chengtao |
author_sort | Yang, Qi |
collection | PubMed |
description | Insertion/deletion polymorphisms (InDels) have been treated as a prospective and helpful genetic marker in the fields of forensic human identification, anthropology and population genetics for the past few years. In this study, we developed a six-dye multiplex typing system consisting of 34 autosomal InDels and Amelogenin for forensic application. The contained InDels were specifically selected for Chinese population with the MAF ≥ 0.25 in East Asia, which do not overlap with the markers of Investigator(®) DIPplex kit. The typing system was named as Goldeneye(TM) DNA ID System 35InDel Kit, and a series of developmental validation studies including repeatability/reproducibility, concordance, accuracy, sensitivity, stability, species specificity and population genetics were conducted on this kit. We confirmed that the 35InDel kit is precise, sensitive, species specific and robust for forensic practice. Moreover, the 35InDel kit is capable of typing DNA extracted from forensic routine case-type samples as well as degraded samples and mixture samples. All markers are proved to be highly polymorphic with an average observed heterozygosity (He) of 0.4582. The combined power of discrimination (CPD) is 0.999 999 999 999 978 and the combined power of exclusion in duos (CPE(D)) and trios (CPE(T)) are 0.978 837 and 0.999573, respectively, which are higher than those of the Investigator(®) DIPplex kit. Thus, the Goldeneye(TM) DNA ID System 35InDel kit is suitable for forensic human identification and could serve as a supplementary typing system for paternity testing. Supplemental data for this article is available online at https://doi.org/10.1080/20961790.2021.1945723 . |
format | Online Article Text |
id | pubmed-9930762 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-99307622023-02-16 Developmental validation of the novel six-dye Goldeneye(TM) DNA ID System 35InDel kit for forensic application Yang, Qi Yu, Huan Qu, Yiling Zhang, Xiaochun Xia, Ruocheng Wang, Ziwei Tan, Rui Xiong, Lei Xi, Shihan Wu, Jun Gao, Yuzhen Zhang, Suhua Li, Chengtao Forensic Sci Res Research Articles Insertion/deletion polymorphisms (InDels) have been treated as a prospective and helpful genetic marker in the fields of forensic human identification, anthropology and population genetics for the past few years. In this study, we developed a six-dye multiplex typing system consisting of 34 autosomal InDels and Amelogenin for forensic application. The contained InDels were specifically selected for Chinese population with the MAF ≥ 0.25 in East Asia, which do not overlap with the markers of Investigator(®) DIPplex kit. The typing system was named as Goldeneye(TM) DNA ID System 35InDel Kit, and a series of developmental validation studies including repeatability/reproducibility, concordance, accuracy, sensitivity, stability, species specificity and population genetics were conducted on this kit. We confirmed that the 35InDel kit is precise, sensitive, species specific and robust for forensic practice. Moreover, the 35InDel kit is capable of typing DNA extracted from forensic routine case-type samples as well as degraded samples and mixture samples. All markers are proved to be highly polymorphic with an average observed heterozygosity (He) of 0.4582. The combined power of discrimination (CPD) is 0.999 999 999 999 978 and the combined power of exclusion in duos (CPE(D)) and trios (CPE(T)) are 0.978 837 and 0.999573, respectively, which are higher than those of the Investigator(®) DIPplex kit. Thus, the Goldeneye(TM) DNA ID System 35InDel kit is suitable for forensic human identification and could serve as a supplementary typing system for paternity testing. Supplemental data for this article is available online at https://doi.org/10.1080/20961790.2021.1945723 . Taylor & Francis 2021-08-28 /pmc/articles/PMC9930762/ /pubmed/36817233 http://dx.doi.org/10.1080/20961790.2021.1945723 Text en © 2021 The Author(s). Published by Taylor & Francis Group on behalf of the Academy of Forensic Science. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Yang, Qi Yu, Huan Qu, Yiling Zhang, Xiaochun Xia, Ruocheng Wang, Ziwei Tan, Rui Xiong, Lei Xi, Shihan Wu, Jun Gao, Yuzhen Zhang, Suhua Li, Chengtao Developmental validation of the novel six-dye Goldeneye(TM) DNA ID System 35InDel kit for forensic application |
title | Developmental validation of the novel six-dye Goldeneye(TM) DNA ID System 35InDel kit for forensic application |
title_full | Developmental validation of the novel six-dye Goldeneye(TM) DNA ID System 35InDel kit for forensic application |
title_fullStr | Developmental validation of the novel six-dye Goldeneye(TM) DNA ID System 35InDel kit for forensic application |
title_full_unstemmed | Developmental validation of the novel six-dye Goldeneye(TM) DNA ID System 35InDel kit for forensic application |
title_short | Developmental validation of the novel six-dye Goldeneye(TM) DNA ID System 35InDel kit for forensic application |
title_sort | developmental validation of the novel six-dye goldeneye(tm) dna id system 35indel kit for forensic application |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9930762/ https://www.ncbi.nlm.nih.gov/pubmed/36817233 http://dx.doi.org/10.1080/20961790.2021.1945723 |
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